Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 BX842568.4-201ENST00000421222 227 ntBASIC17.44■□□□□ 0.38
RPRD1AQ96P16 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 KRT19P2-202ENST00000557173 1012 ntBASIC17.44■□□□□ 0.38
RPRD1AQ96P16 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 AC092865.5-201ENST00000545435 363 ntBASIC17.43■□□□□ 0.38
RPRD1AQ96P16 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 AL353732.1-201ENST00000569618 1459 ntBASIC17.43■□□□□ 0.38
RPRD1AQ96P16 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPRD1AQ96P16 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 PDPK2P-202ENST00000562415 1191 ntBASIC17.42■□□□□ 0.38
RPRD1AQ96P16 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPRD1AQ96P16 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 AL121761.2-201ENST00000598007 1648 ntBASIC17.41■□□□□ 0.38
RPRD1AQ96P16 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 AC004832.2-201ENST00000426397 482 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms