Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CFAP53Q96M91 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CFAP53Q96M91 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CFAP53Q96M91 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.58■■□□□ 1.21
CFAP53Q96M91 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC22.58■■□□□ 1.21
CFAP53Q96M91 THTPA-204ENST00000554970 569 ntTSL 4 BASIC22.58■■□□□ 1.21
CFAP53Q96M91 THTPA-206ENST00000556015 535 ntTSL 3 BASIC22.58■■□□□ 1.21
CFAP53Q96M91 CYP2A7P1-201ENST00000595391 815 ntBASIC22.58■■□□□ 1.21
CFAP53Q96M91 AC013467.2-201ENST00000605472 835 ntBASIC22.58■■□□□ 1.21
CFAP53Q96M91 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CFAP53Q96M91 AC026471.1-201ENST00000564629 3026 ntBASIC22.58■■□□□ 1.21
CFAP53Q96M91 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP53Q96M91 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP53Q96M91 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
CFAP53Q96M91 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
CFAP53Q96M91 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP53Q96M91 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP53Q96M91 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC22.58■■□□□ 1.2
CFAP53Q96M91 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
CFAP53Q96M91 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP53Q96M91 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 AC092919.2-201ENST00000623631 1645 ntBASIC22.57■■□□□ 1.2
CFAP53Q96M91 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.57■■□□□ 1.2
CFAP53Q96M91 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.57■■□□□ 1.2
CFAP53Q96M91 AC140658.5-201ENST00000438532 169 ntBASIC22.57■■□□□ 1.2
CFAP53Q96M91 AC112482.1-201ENST00000492080 688 ntBASIC22.57■■□□□ 1.2
CFAP53Q96M91 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC22.57■■□□□ 1.2
CFAP53Q96M91 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CFAP53Q96M91 AP002472.1-201ENST00000577490 586 ntBASIC22.57■■□□□ 1.2
CFAP53Q96M91 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC22.57■■□□□ 1.2
CFAP53Q96M91 AL078644.1-201ENST00000609881 752 ntBASIC22.57■■□□□ 1.2
CFAP53Q96M91 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CFAP53Q96M91 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CFAP53Q96M91 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CFAP53Q96M91 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP53Q96M91 LINC00895-201ENST00000629028 1637 ntBASIC22.57■■□□□ 1.2
CFAP53Q96M91 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CFAP53Q96M91 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP53Q96M91 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP53Q96M91 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP53Q96M91 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 MIR1233-2-201ENST00000408138 82 ntBASIC22.56■■□□□ 1.2
CFAP53Q96M91 MIR1233-1-201ENST00000408722 82 ntBASIC22.56■■□□□ 1.2
CFAP53Q96M91 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 FAM58CP-201ENST00000435741 640 ntBASIC22.56■■□□□ 1.2
CFAP53Q96M91 MKNK2P1-201ENST00000437526 628 ntBASIC22.56■■□□□ 1.2
CFAP53Q96M91 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 ALG1L5P-201ENST00000482043 771 ntBASIC22.56■■□□□ 1.2
CFAP53Q96M91 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 AC005829.1-201ENST00000570002 483 ntBASIC22.56■■□□□ 1.2
CFAP53Q96M91 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP53Q96M91 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC22.56■■□□□ 1.2
CFAP53Q96M91 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP53Q96M91 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP53Q96M91 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP53Q96M91 AC006277.1-201ENST00000624348 1610 ntBASIC22.56■■□□□ 1.2
CFAP53Q96M91 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP53Q96M91 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 HTR5BP-201ENST00000430851 1154 ntBASIC22.55■■□□□ 1.2
CFAP53Q96M91 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 AC112191.1-201ENST00000523689 701 ntBASIC22.55■■□□□ 1.2
CFAP53Q96M91 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 AC091812.2-201ENST00000619081 385 ntBASIC22.55■■□□□ 1.2
CFAP53Q96M91 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CFAP53Q96M91 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP53Q96M91 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms