Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AC005237.2-201ENST00000434368 219 ntBASIC18.32■□□□□ 0.52
PGBD4Q96DM1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AL592309.1-201ENST00000443127 649 ntBASIC18.32■□□□□ 0.52
PGBD4Q96DM1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 KRT8P48-201ENST00000515599 1220 ntBASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AC109635.5-201ENST00000533593 962 ntBASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.32■□□□□ 0.52
PGBD4Q96DM1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AC116353.5-201ENST00000638148 1699 ntBASIC18.31■□□□□ 0.52
PGBD4Q96DM1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 AL627223.1-201ENST00000416693 442 ntBASIC18.31■□□□□ 0.52
PGBD4Q96DM1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.31■□□□□ 0.52
PGBD4Q96DM1 AC079140.1-201ENST00000508039 487 ntBASIC18.31■□□□□ 0.52
PGBD4Q96DM1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 AL135744.1-201ENST00000565098 629 ntBASIC18.31■□□□□ 0.52
PGBD4Q96DM1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 LINC00628-201ENST00000628516 1289 ntBASIC18.31■□□□□ 0.52
PGBD4Q96DM1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD4Q96DM1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 SLC25A1P3-201ENST00000395415 828 ntBASIC18.3■□□□□ 0.52
PGBD4Q96DM1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 AC092474.2-201ENST00000424288 719 ntBASIC18.3■□□□□ 0.52
PGBD4Q96DM1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 AC087641.1-201ENST00000557561 1021 ntBASIC18.3■□□□□ 0.52
PGBD4Q96DM1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD4Q96DM1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 DUX4L17-201ENST00000557360 1267 ntBASIC18.29■□□□□ 0.52
PGBD4Q96DM1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms