Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C3orf56Q8N813 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C3orf56Q8N813 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C3orf56Q8N813 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C3orf56Q8N813 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
C3orf56Q8N813 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C3orf56Q8N813 AC012569.1-201ENST00000591191 1524 ntBASIC13.23□□□□□ -0.29
C3orf56Q8N813 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 AC138969.3-201ENST00000546612 1459 ntBASIC13.23□□□□□ -0.29
C3orf56Q8N813 AC138932.2-201ENST00000548268 1459 ntBASIC13.23□□□□□ -0.29
C3orf56Q8N813 AC126755.4-201ENST00000549796 1459 ntBASIC13.23□□□□□ -0.29
C3orf56Q8N813 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 HILS1-202ENST00000545329 423 ntBASIC13.23□□□□□ -0.29
C3orf56Q8N813 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 AC084121.4-201ENST00000641598 221 ntBASIC13.23□□□□□ -0.29
C3orf56Q8N813 AF228730.8-201ENST00000642140 221 ntBASIC13.23□□□□□ -0.29
C3orf56Q8N813 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 AC099398.1-201ENST00000567919 2776 ntBASIC13.23□□□□□ -0.29
C3orf56Q8N813 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.23□□□□□ -0.29
C3orf56Q8N813 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C3orf56Q8N813 WASH6P-202ENST00000359512 1437 ntBASIC13.22□□□□□ -0.29
C3orf56Q8N813 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 AC098614.1-201ENST00000368528 745 ntBASIC13.22□□□□□ -0.29
C3orf56Q8N813 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 HMGA1P7-201ENST00000406908 502 ntBASIC13.22□□□□□ -0.29
C3orf56Q8N813 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 MRPS18AP1-201ENST00000414458 589 ntBASIC13.22□□□□□ -0.29
C3orf56Q8N813 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 U91328.1-201ENST00000437528 223 ntBASIC13.22□□□□□ -0.29
C3orf56Q8N813 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 GIMAP3P-201ENST00000495150 836 ntBASIC13.22□□□□□ -0.29
C3orf56Q8N813 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C3orf56Q8N813 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.22□□□□□ -0.29
C3orf56Q8N813 AC005412.3-201ENST00000580309 715 ntBASIC13.22□□□□□ -0.29
C3orf56Q8N813 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms