Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SIX5Q8N196 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.31■□□□□ 0.36
SIX5Q8N196 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.31■□□□□ 0.36
SIX5Q8N196 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.31■□□□□ 0.36
SIX5Q8N196 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.31■□□□□ 0.36
SIX5Q8N196 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.31■□□□□ 0.36
SIX5Q8N196 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.31■□□□□ 0.36
SIX5Q8N196 AC027307.2-201ENST00000591252 911 ntBASIC17.31■□□□□ 0.36
SIX5Q8N196 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX5Q8N196 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SIX5Q8N196 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 AC135776.1-201ENST00000319817 2481 ntBASIC17.31■□□□□ 0.36
SIX5Q8N196 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SIX5Q8N196 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 AC022144.1-201ENST00000602255 1580 ntBASIC17.31■□□□□ 0.36
SIX5Q8N196 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.31■□□□□ 0.36
SIX5Q8N196 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX5Q8N196 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.3■□□□□ 0.36
SIX5Q8N196 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SIX5Q8N196 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SIX5Q8N196 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 PCDHB18P-201ENST00000524813 2368 ntBASIC17.3■□□□□ 0.36
SIX5Q8N196 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.3■□□□□ 0.36
SIX5Q8N196 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SIX5Q8N196 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.3■□□□□ 0.36
SIX5Q8N196 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SIX5Q8N196 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.3■□□□□ 0.36
SIX5Q8N196 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 AC109635.5-201ENST00000533593 962 ntBASIC17.3■□□□□ 0.36
SIX5Q8N196 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.3■□□□□ 0.36
SIX5Q8N196 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.3■□□□□ 0.36
SIX5Q8N196 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.3■□□□□ 0.36
SIX5Q8N196 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.3■□□□□ 0.36
SIX5Q8N196 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SIX5Q8N196 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SIX5Q8N196 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SIX5Q8N196 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX5Q8N196 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SIX5Q8N196 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.29■□□□□ 0.36
SIX5Q8N196 REXO1L9P-201ENST00000604264 2108 ntBASIC17.29■□□□□ 0.36
SIX5Q8N196 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.29■□□□□ 0.36
SIX5Q8N196 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
SIX5Q8N196 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.29■□□□□ 0.36
SIX5Q8N196 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SIX5Q8N196 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SIX5Q8N196 GPR53P-205ENST00000457298 1084 ntBASIC17.29■□□□□ 0.36
SIX5Q8N196 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.29■□□□□ 0.36
SIX5Q8N196 IGHV3-71-201ENST00000523324 359 ntBASIC17.29■□□□□ 0.36
SIX5Q8N196 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.29■□□□□ 0.36
SIX5Q8N196 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms