Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 Z83836.1-201ENST00000624605 1642 ntBASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 AC097374.2-201ENST00000618617 1306 ntBASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 CHCHD2P8-201ENST00000429873 447 ntBASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 DUSP5P1-201ENST00000441325 1139 ntBASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 AP002383.4-201ENST00000442518 975 ntBASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 AC092329.2-201ENST00000598402 547 ntBASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.98■□□□□ 0.31
CRLF3Q8IUI8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 AC068472.1-201ENST00000474589 881 ntBASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 KRT126P-201ENST00000549467 1181 ntBASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 MIR3180-1-201ENST00000580374 94 ntBASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 MIR3180-3-201ENST00000584616 94 ntBASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 AP002414.4-201ENST00000589764 1148 ntBASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 AC005332.3-201ENST00000589904 676 ntBASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms