Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 PCDH8P1-201ENST00000428983 2773 ntBASIC15.68■□□□□ 0.1
VRK2Q86Y07 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.68■□□□□ 0.1
VRK2Q86Y07 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 FGFR3P6-201ENST00000457012 610 ntBASIC15.68■□□□□ 0.1
VRK2Q86Y07 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 AC091304.2-201ENST00000564639 760 ntBASIC15.68■□□□□ 0.1
VRK2Q86Y07 PRELID1P1-202ENST00000567272 903 ntBASIC15.68■□□□□ 0.1
VRK2Q86Y07 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 TERC-201ENST00000602385 541 ntBASIC15.68■□□□□ 0.1
VRK2Q86Y07 AC008608.2-201ENST00000606089 416 ntBASIC15.68■□□□□ 0.1
VRK2Q86Y07 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VRK2Q86Y07 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK2Q86Y07 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 AL139424.1-201ENST00000607572 797 ntBASIC15.67■□□□□ 0.1
VRK2Q86Y07 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VRK2Q86Y07 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK2Q86Y07 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK2Q86Y07 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.66■□□□□ 0.1
VRK2Q86Y07 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.66■□□□□ 0.1
VRK2Q86Y07 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
VRK2Q86Y07 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VRK2Q86Y07 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK2Q86Y07 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VRK2Q86Y07 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VRK2Q86Y07 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VRK2Q86Y07 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms