Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB1Q86U70 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB1Q86U70 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB1Q86U70 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB1Q86U70 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.93■□□□□ 0.3
LDB1Q86U70 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB1Q86U70 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.93■□□□□ 0.3
LDB1Q86U70 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDB1Q86U70 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
LDB1Q86U70 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LDB1Q86U70 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
LDB1Q86U70 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LDB1Q86U70 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.92■□□□□ 0.3
LDB1Q86U70 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LDB1Q86U70 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.92■□□□□ 0.3
LDB1Q86U70 LAGE3P1-201ENST00000425356 484 ntBASIC16.92■□□□□ 0.3
LDB1Q86U70 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.92■□□□□ 0.3
LDB1Q86U70 AC012640.2-201ENST00000561606 901 ntBASIC16.92■□□□□ 0.3
LDB1Q86U70 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.92■□□□□ 0.3
LDB1Q86U70 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.92■□□□□ 0.3
LDB1Q86U70 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 PI4KAP1-204ENST00000612579 1703 ntBASIC16.92■□□□□ 0.3
LDB1Q86U70 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.92■□□□□ 0.3
LDB1Q86U70 PCDH8P1-201ENST00000428983 2773 ntBASIC16.92■□□□□ 0.3
LDB1Q86U70 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB1Q86U70 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB1Q86U70 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.92■□□□□ 0.3
LDB1Q86U70 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 PCDHB19P-201ENST00000570871 2371 ntBASIC16.92■□□□□ 0.3
LDB1Q86U70 AL662844.4-201ENST00000606367 2838 ntBASIC16.92■□□□□ 0.3
LDB1Q86U70 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB1Q86U70 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB1Q86U70 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB1Q86U70 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB1Q86U70 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LDB1Q86U70 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB1Q86U70 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB1Q86U70 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB1Q86U70 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
LDB1Q86U70 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 TUBB8P12-201ENST00000308911 1335 ntBASIC16.91■□□□□ 0.3
LDB1Q86U70 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 TUBB7P-202ENST00000428444 1305 ntBASIC16.91■□□□□ 0.3
LDB1Q86U70 TUBB8P7-204ENST00000567960 1332 ntBASIC16.91■□□□□ 0.3
LDB1Q86U70 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB1Q86U70 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LDB1Q86U70 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB1Q86U70 AL391256.1-201ENST00000443260 1855 ntBASIC16.9■□□□□ 0.3
LDB1Q86U70 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.9■□□□□ 0.3
LDB1Q86U70 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.9■□□□□ 0.3
LDB1Q86U70 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
LDB1Q86U70 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms