Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 AL353593.2-201ENST00000602529 1483 ntBASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 AL049757.1-201ENST00000616842 1596 ntBASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 PCDH8P1-201ENST00000428983 2773 ntBASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 HLA-J-201ENST00000462773 1622 ntBASIC15.72■□□□□ 0.11
CHMP1BQ7LBR1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 HLA-A-201ENST00000376802 1334 ntBASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 SPDYE21P-201ENST00000413323 827 ntBASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 AL590627.1-203ENST00000421194 1026 ntBASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 RPS2P1-201ENST00000434010 821 ntBASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP1BQ7LBR1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CHMP1BQ7LBR1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP1BQ7LBR1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP1BQ7LBR1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP1BQ7LBR1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP1BQ7LBR1 AC108860.2-201ENST00000562760 2183 ntBASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP1BQ7LBR1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms