Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 CICP6-201ENST00000457191 2729 ntBASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 AC126755.1-201ENST00000525846 6405 ntBASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 ACTG1P4-201ENST00000425123 1122 ntBASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 UPK3BP1-201ENST00000428678 509 ntBASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST3H2AQ7L7L0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 AC092068.3-201ENST00000587894 2016 ntBASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 MIR3652-201ENST00000579335 131 ntBASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.5■□□□□ 0.07
HIST3H2AQ7L7L0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 AC132008.2-207ENST00000454517 770 ntBASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 SIGLEC16-201ENST00000599858 1437 ntBASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST3H2AQ7L7L0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms