Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP50Q70EL3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP50Q70EL3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.71■□□□□ 0.75
USP50Q70EL3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.71■□□□□ 0.75
USP50Q70EL3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.71■□□□□ 0.75
USP50Q70EL3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.71■□□□□ 0.75
USP50Q70EL3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.71■□□□□ 0.75
USP50Q70EL3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.71■□□□□ 0.75
USP50Q70EL3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.71■□□□□ 0.75
USP50Q70EL3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
USP50Q70EL3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP50Q70EL3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP50Q70EL3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
USP50Q70EL3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP50Q70EL3 KRT8P12-202ENST00000472924 1397 ntBASIC19.7■□□□□ 0.74
USP50Q70EL3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
USP50Q70EL3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.7■□□□□ 0.74
USP50Q70EL3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
USP50Q70EL3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
USP50Q70EL3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
USP50Q70EL3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 AC092933.1-201ENST00000393644 945 ntBASIC19.7■□□□□ 0.74
USP50Q70EL3 AC098850.1-201ENST00000419919 790 ntBASIC19.7■□□□□ 0.74
USP50Q70EL3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.7■□□□□ 0.74
USP50Q70EL3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
USP50Q70EL3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.7■□□□□ 0.74
USP50Q70EL3 CROCCP4-201ENST00000457096 498 ntBASIC19.7■□□□□ 0.74
USP50Q70EL3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.7■□□□□ 0.74
USP50Q70EL3 TMEM261P1-201ENST00000604899 340 ntBASIC19.7■□□□□ 0.74
USP50Q70EL3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.7■□□□□ 0.74
USP50Q70EL3 WFDC1-204ENST00000613603 549 ntBASIC19.7■□□□□ 0.74
USP50Q70EL3 MIR6869-201ENST00000619434 62 ntBASIC19.7■□□□□ 0.74
USP50Q70EL3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
USP50Q70EL3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.7■□□□□ 0.74
USP50Q70EL3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP50Q70EL3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP50Q70EL3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.69■□□□□ 0.74
USP50Q70EL3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.69■□□□□ 0.74
USP50Q70EL3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.69■□□□□ 0.74
USP50Q70EL3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.69■□□□□ 0.74
USP50Q70EL3 ANKRD19P-201ENST00000338192 862 ntBASIC19.69■□□□□ 0.74
USP50Q70EL3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
USP50Q70EL3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.69■□□□□ 0.74
USP50Q70EL3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.69■□□□□ 0.74
USP50Q70EL3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.69■□□□□ 0.74
USP50Q70EL3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP50Q70EL3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.69■□□□□ 0.74
USP50Q70EL3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.69■□□□□ 0.74
USP50Q70EL3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.69■□□□□ 0.74
USP50Q70EL3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.69■□□□□ 0.74
USP50Q70EL3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.69■□□□□ 0.74
USP50Q70EL3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.69■□□□□ 0.74
USP50Q70EL3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.69■□□□□ 0.74
USP50Q70EL3 GPR182-203ENST00000622922 591 ntBASIC19.69■□□□□ 0.74
USP50Q70EL3 AC068587.10-201ENST00000641210 219 ntBASIC19.69■□□□□ 0.74
USP50Q70EL3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.69■□□□□ 0.74
USP50Q70EL3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP50Q70EL3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.68■□□□□ 0.74
USP50Q70EL3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP50Q70EL3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP50Q70EL3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.68■□□□□ 0.74
USP50Q70EL3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP50Q70EL3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP50Q70EL3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.68■□□□□ 0.74
USP50Q70EL3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP50Q70EL3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms