Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 BCRP2-202ENST00000447763 634 ntBASIC14.5□□□□□ -0.09
LRRK2Q5S007 RPL13AP20-201ENST00000459725 609 ntBASIC14.5□□□□□ -0.09
LRRK2Q5S007 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 BCRP6-201ENST00000510112 632 ntBASIC14.5□□□□□ -0.09
LRRK2Q5S007 BCRP7-201ENST00000511549 544 ntBASIC14.5□□□□□ -0.09
LRRK2Q5S007 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 AC073439.1-201ENST00000624121 1774 ntBASIC14.5□□□□□ -0.09
LRRK2Q5S007 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 LINC00895-201ENST00000629028 1637 ntBASIC14.5□□□□□ -0.09
LRRK2Q5S007 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 FLJ13224-201ENST00000313737 1514 ntBASIC14.49□□□□□ -0.09
LRRK2Q5S007 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 CDC14C-201ENST00000428251 1719 ntBASIC14.49□□□□□ -0.09
LRRK2Q5S007 AC131009.4-201ENST00000624048 1740 ntBASIC14.49□□□□□ -0.09
LRRK2Q5S007 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 LDHBP1-201ENST00000455730 1119 ntBASIC14.49□□□□□ -0.09
LRRK2Q5S007 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 SPCS2P2-201ENST00000603270 608 ntBASIC14.49□□□□□ -0.09
LRRK2Q5S007 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRK2Q5S007 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LRRK2Q5S007 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 YBX1P6-201ENST00000442962 1002 ntBASIC14.48□□□□□ -0.09
LRRK2Q5S007 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 KRT18P34-201ENST00000488218 1270 ntBASIC14.48□□□□□ -0.09
LRRK2Q5S007 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 AL118558.3-201ENST00000607414 1079 ntBASIC14.48□□□□□ -0.09
LRRK2Q5S007 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms