Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KHDC1Q4VXA5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KHDC1Q4VXA5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
KHDC1Q4VXA5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KHDC1Q4VXA5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KHDC1Q4VXA5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 PRYP5-201ENST00000451909 266 ntBASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 AL049840.3-201ENST00000602669 611 ntBASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KHDC1Q4VXA5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KHDC1Q4VXA5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
KHDC1Q4VXA5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.21■□□□□ 0.34
KHDC1Q4VXA5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
KHDC1Q4VXA5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
KHDC1Q4VXA5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 AL135999.2-201ENST00000622438 1686 ntBASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 SIGLEC30P-201ENST00000455569 941 ntBASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 AC073648.2-201ENST00000510116 352 ntBASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 AC064862.7-201ENST00000604520 867 ntBASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 HLA-A-201ENST00000376802 1334 ntBASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.2■□□□□ 0.34
KHDC1Q4VXA5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 AC007950.2-201ENST00000615045 2347 ntBASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
KHDC1Q4VXA5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms