Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX4Q33E94 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX4Q33E94 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX4Q33E94 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
RFX4Q33E94 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 AC068587.6-202ENST00000641839 5619 ntBASIC15.81■□□□□ 0.12
RFX4Q33E94 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
RFX4Q33E94 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.81■□□□□ 0.12
RFX4Q33E94 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.81■□□□□ 0.12
RFX4Q33E94 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.81■□□□□ 0.12
RFX4Q33E94 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RFX4Q33E94 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.81■□□□□ 0.12
RFX4Q33E94 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.81■□□□□ 0.12
RFX4Q33E94 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.81■□□□□ 0.12
RFX4Q33E94 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.81■□□□□ 0.12
RFX4Q33E94 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RFX4Q33E94 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 HYMAI.1-201ENST00000620949 238 ntBASIC15.81■□□□□ 0.12
RFX4Q33E94 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RFX4Q33E94 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFX4Q33E94 LINC00554-201ENST00000564841 3011 ntBASIC15.81■□□□□ 0.12
RFX4Q33E94 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 AC104640.1-201ENST00000562617 2109 ntBASIC15.8■□□□□ 0.12
RFX4Q33E94 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.8■□□□□ 0.12
RFX4Q33E94 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.8■□□□□ 0.12
RFX4Q33E94 Z83836.1-201ENST00000624605 1642 ntBASIC15.8■□□□□ 0.12
RFX4Q33E94 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RFX4Q33E94 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RFX4Q33E94 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.8■□□□□ 0.12
RFX4Q33E94 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 GPR89P-201ENST00000407924 1495 ntBASIC15.8■□□□□ 0.12
RFX4Q33E94 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFX4Q33E94 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RFX4Q33E94 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RFX4Q33E94 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 AC005521.1-201ENST00000393351 872 ntBASIC15.8■□□□□ 0.12
RFX4Q33E94 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.8■□□□□ 0.12
RFX4Q33E94 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.8■□□□□ 0.12
RFX4Q33E94 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.8■□□□□ 0.12
RFX4Q33E94 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.8■□□□□ 0.12
RFX4Q33E94 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
RFX4Q33E94 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.8■□□□□ 0.12
RFX4Q33E94 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RFX4Q33E94 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFX4Q33E94 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.8■□□□□ 0.12
RFX4Q33E94 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.8■□□□□ 0.12
RFX4Q33E94 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFX4Q33E94 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RFX4Q33E94 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFX4Q33E94 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.8■□□□□ 0.12
RFX4Q33E94 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFX4Q33E94 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.79■□□□□ 0.12
RFX4Q33E94 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.79■□□□□ 0.12
RFX4Q33E94 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFX4Q33E94 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFX4Q33E94 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RFX4Q33E94 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms