Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 TREML5P-201ENST00000421694 576 ntBASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 AL135744.1-201ENST00000565098 629 ntBASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 NKILA-202ENST00000614771 2598 ntBASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTC1Q2NKJ3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 RBPMS2P1-201ENST00000437762 623 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 CRB3P1-201ENST00000449338 276 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 LINC01225-203ENST00000563550 1244 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 RARRES2P8-201ENST00000566335 367 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 AL158211.3-201ENST00000607385 239 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 AL008721.1-201ENST00000609964 604 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 AC084121.4-201ENST00000641598 221 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 AF228730.8-201ENST00000642140 221 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 AC011676.5-201ENST00000624864 2660 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 AC008677.1-201ENST00000519230 1561 ntBASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTC1Q2NKJ3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 OR8S1-201ENST00000310194 1080 ntBASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 SPCS2P4-201ENST00000436160 681 ntBASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 AC087163.2-201ENST00000457299 853 ntBASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 AL390754.1-201ENST00000619088 582 ntBASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms