Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.81■□□□□ 0.92
DDR1Q08345 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
DDR1Q08345 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.81■□□□□ 0.92
DDR1Q08345 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 MIR6805-201ENST00000615055 62 ntBASIC20.81■□□□□ 0.92
DDR1Q08345 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.81■□□□□ 0.92
DDR1Q08345 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 AL391825.1-201ENST00000457671 1364 ntBASIC20.81■□□□□ 0.92
DDR1Q08345 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.81■□□□□ 0.92
DDR1Q08345 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DDR1Q08345 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.81■□□□□ 0.92
DDR1Q08345 AC093525.9-201ENST00000624961 1746 ntBASIC20.81■□□□□ 0.92
DDR1Q08345 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.81■□□□□ 0.92
DDR1Q08345 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
DDR1Q08345 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DDR1Q08345 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 AC022210.1-201ENST00000449856 793 ntBASIC20.8■□□□□ 0.92
DDR1Q08345 DOC2GP-202ENST00000514950 1163 ntBASIC20.8■□□□□ 0.92
DDR1Q08345 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDR1Q08345 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.8■□□□□ 0.92
DDR1Q08345 AC106886.1-201ENST00000568660 600 ntBASIC20.8■□□□□ 0.92
DDR1Q08345 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.8■□□□□ 0.92
DDR1Q08345 AC007431.3-201ENST00000623221 587 ntBASIC20.8■□□□□ 0.92
DDR1Q08345 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.8■□□□□ 0.92
DDR1Q08345 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DDR1Q08345 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDR1Q08345 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DDR1Q08345 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DDR1Q08345 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.79■□□□□ 0.92
DDR1Q08345 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DDR1Q08345 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.79■□□□□ 0.92
DDR1Q08345 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.79■□□□□ 0.92
DDR1Q08345 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.79■□□□□ 0.92
DDR1Q08345 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.79■□□□□ 0.92
DDR1Q08345 AC087499.6-201ENST00000411576 835 ntBASIC20.79■□□□□ 0.92
DDR1Q08345 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.79■□□□□ 0.92
DDR1Q08345 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.79■□□□□ 0.92
DDR1Q08345 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.79■□□□□ 0.92
DDR1Q08345 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.79■□□□□ 0.92
DDR1Q08345 AC044860.1-202ENST00000559481 777 ntBASIC20.79■□□□□ 0.92
DDR1Q08345 MIR4259-201ENST00000584466 101 ntBASIC20.79■□□□□ 0.92
DDR1Q08345 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.79■□□□□ 0.92
DDR1Q08345 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
DDR1Q08345 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.79■□□□□ 0.92
DDR1Q08345 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDR1Q08345 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.79■□□□□ 0.92
DDR1Q08345 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
DDR1Q08345 AL023806.1-201ENST00000603994 1649 ntBASIC20.78■□□□□ 0.92
DDR1Q08345 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.78■□□□□ 0.92
DDR1Q08345 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.78■□□□□ 0.92
DDR1Q08345 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.78■□□□□ 0.92
DDR1Q08345 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.78■□□□□ 0.92
DDR1Q08345 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
DDR1Q08345 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DDR1Q08345 AC093004.1-201ENST00000508850 424 ntBASIC20.78■□□□□ 0.92
DDR1Q08345 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDR1Q08345 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.78■□□□□ 0.92
DDR1Q08345 RAB43P1-201ENST00000561790 589 ntBASIC20.78■□□□□ 0.92
DDR1Q08345 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.78■□□□□ 0.92
DDR1Q08345 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.78■□□□□ 0.92
DDR1Q08345 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.78■□□□□ 0.92
DDR1Q08345 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.78■□□□□ 0.92
DDR1Q08345 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.78■□□□□ 0.92
DDR1Q08345 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms