Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CL1P78423 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.71□□□□□ -0.22
CX3CL1P78423 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
CX3CL1P78423 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CX3CL1P78423 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CX3CL1P78423 AL513477.1-201ENST00000602865 2407 ntBASIC13.7□□□□□ -0.22
CX3CL1P78423 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CX3CL1P78423 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CX3CL1P78423 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 SLC25A1P3-201ENST00000395415 828 ntBASIC13.7□□□□□ -0.22
CX3CL1P78423 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.7□□□□□ -0.22
CX3CL1P78423 ACTG1P4-201ENST00000425123 1122 ntBASIC13.7□□□□□ -0.22
CX3CL1P78423 AL450487.1-201ENST00000426799 995 ntBASIC13.7□□□□□ -0.22
CX3CL1P78423 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.7□□□□□ -0.22
CX3CL1P78423 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.7□□□□□ -0.22
CX3CL1P78423 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 SART3-203ENST00000546611 1184 ntBASIC13.7□□□□□ -0.22
CX3CL1P78423 KRT126P-201ENST00000549467 1181 ntBASIC13.7□□□□□ -0.22
CX3CL1P78423 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.7□□□□□ -0.22
CX3CL1P78423 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.7□□□□□ -0.22
CX3CL1P78423 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CL1P78423 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CX3CL1P78423 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CL1P78423 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.7□□□□□ -0.22
CX3CL1P78423 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CL1P78423 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CL1P78423 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CX3CL1P78423 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CL1P78423 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CL1P78423 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CX3CL1P78423 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CL1P78423 AC106886.4-201ENST00000623557 2502 ntBASIC13.69□□□□□ -0.22
CX3CL1P78423 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.69□□□□□ -0.22
CX3CL1P78423 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 AGGF1P2-201ENST00000426656 2106 ntBASIC13.69□□□□□ -0.22
CX3CL1P78423 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 FLJ16779-201ENST00000612722 7638 ntBASIC13.69□□□□□ -0.22
CX3CL1P78423 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.69□□□□□ -0.22
CX3CL1P78423 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CX3CL1P78423 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CL1P78423 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.69□□□□□ -0.22
CX3CL1P78423 LINC00982-205ENST00000420957 435 ntBASIC13.69□□□□□ -0.22
CX3CL1P78423 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.69□□□□□ -0.22
CX3CL1P78423 EMBP1-201ENST00000458200 901 ntBASIC13.69□□□□□ -0.22
CX3CL1P78423 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CX3CL1P78423 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.69□□□□□ -0.22
CX3CL1P78423 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.69□□□□□ -0.22
CX3CL1P78423 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
CX3CL1P78423 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.69□□□□□ -0.22
CX3CL1P78423 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.69□□□□□ -0.22
CX3CL1P78423 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CL1P78423 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CX3CL1P78423 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.69□□□□□ -0.22
CX3CL1P78423 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CL1P78423 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CX3CL1P78423 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.69□□□□□ -0.22
CX3CL1P78423 LINC02012-201ENST00000608206 1725 ntBASIC13.69□□□□□ -0.22
CX3CL1P78423 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CX3CL1P78423 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms