Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 MIR3180-4-201ENST00000582223 153 ntBASIC13.23□□□□□ -0.29
ERVFC1-1P60608 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.23□□□□□ -0.29
ERVFC1-1P60608 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 AL365203.3-201ENST00000609742 2057 ntBASIC13.23□□□□□ -0.29
ERVFC1-1P60608 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ERVFC1-1P60608 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 KRT8P9-201ENST00000558927 1449 ntBASIC13.22□□□□□ -0.29
ERVFC1-1P60608 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.22□□□□□ -0.29
ERVFC1-1P60608 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ERVFC1-1P60608 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ERVFC1-1P60608 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ERVFC1-1P60608 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ERVFC1-1P60608 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ERVFC1-1P60608 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms