Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 PI4KAP1-204ENST00000612579 1703 ntBASIC19.41■□□□□ 0.7
CHMP4BP1P59074 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP4BP1P59074 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 DDX43P3-201ENST00000441064 443 ntBASIC19.4■□□□□ 0.7
CHMP4BP1P59074 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 C20orf181-201ENST00000623918 480 ntBASIC19.4■□□□□ 0.7
CHMP4BP1P59074 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 AL139384.1-201ENST00000612143 3047 ntBASIC19.4■□□□□ 0.7
CHMP4BP1P59074 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP4BP1P59074 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP4BP1P59074 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP4BP1P59074 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CHMP4BP1P59074 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CHMP4BP1P59074 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.39■□□□□ 0.7
CHMP4BP1P59074 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP4BP1P59074 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.39■□□□□ 0.7
CHMP4BP1P59074 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP4BP1P59074 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 IGLL3P-201ENST00000412472 434 ntBASIC19.39■□□□□ 0.69
CHMP4BP1P59074 PRSS29P-201ENST00000440800 595 ntBASIC19.39■□□□□ 0.69
CHMP4BP1P59074 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 AC010507.1-201ENST00000633895 436 ntBASIC19.39■□□□□ 0.69
CHMP4BP1P59074 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 AL121761.2-201ENST00000598007 1648 ntBASIC19.39■□□□□ 0.69
CHMP4BP1P59074 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP4BP1P59074 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP4BP1P59074 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP4BP1P59074 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP4BP1P59074 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHMP4BP1P59074 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP4BP1P59074 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP4BP1P59074 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP4BP1P59074 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP4BP1P59074 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms