Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLDN20P56880 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CLDN20P56880 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN20P56880 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN20P56880 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN20P56880 LINC00982-205ENST00000420957 435 ntBASIC15.59■□□□□ 0.09
CLDN20P56880 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN20P56880 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN20P56880 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN20P56880 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN20P56880 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
CLDN20P56880 AC004706.3-202ENST00000621574 984 ntBASIC15.59■□□□□ 0.09
CLDN20P56880 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLDN20P56880 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN20P56880 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
CLDN20P56880 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLDN20P56880 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CLDN20P56880 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN20P56880 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN20P56880 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.58■□□□□ 0.09
CLDN20P56880 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.58■□□□□ 0.09
CLDN20P56880 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CLDN20P56880 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 AC008741.2-201ENST00000612792 3115 ntBASIC15.58■□□□□ 0.08
CLDN20P56880 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.58■□□□□ 0.08
CLDN20P56880 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN20P56880 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN20P56880 KRT18P27-201ENST00000427733 1299 ntBASIC15.58■□□□□ 0.08
CLDN20P56880 AP000347.1-202ENST00000435868 847 ntBASIC15.58■□□□□ 0.08
CLDN20P56880 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN20P56880 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN20P56880 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.58■□□□□ 0.08
CLDN20P56880 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN20P56880 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.58■□□□□ 0.08
CLDN20P56880 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN20P56880 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN20P56880 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 BX640515.1-201ENST00000617215 977 ntBASIC15.58■□□□□ 0.08
CLDN20P56880 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN20P56880 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN20P56880 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN20P56880 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN20P56880 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN20P56880 AC006504.4-201ENST00000592118 1568 ntBASIC15.58■□□□□ 0.08
CLDN20P56880 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CLDN20P56880 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLDN20P56880 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLDN20P56880 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN20P56880 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN20P56880 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN20P56880 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN20P56880 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 AC073621.1-201ENST00000392730 636 ntBASIC15.57■□□□□ 0.08
CLDN20P56880 ELK2BP-201ENST00000415014 1224 ntBASIC15.57■□□□□ 0.08
CLDN20P56880 AC098831.1-202ENST00000438821 336 ntBASIC15.57■□□□□ 0.08
CLDN20P56880 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN20P56880 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms