Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.49■□□□□ 0.55
NCKAP1LP55160 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKAP1LP55160 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.49■□□□□ 0.55
NCKAP1LP55160 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.48■□□□□ 0.55
NCKAP1LP55160 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 AC002347.1-201ENST00000569543 541 ntBASIC18.48■□□□□ 0.55
NCKAP1LP55160 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 AL603756.1-201ENST00000606511 2163 ntBASIC18.48■□□□□ 0.55
NCKAP1LP55160 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.48■□□□□ 0.55
NCKAP1LP55160 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKAP1LP55160 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 AC004832.2-201ENST00000426397 482 ntBASIC18.47■□□□□ 0.55
NCKAP1LP55160 AC074386.1-202ENST00000463561 864 ntBASIC18.47■□□□□ 0.55
NCKAP1LP55160 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKAP1LP55160 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.47■□□□□ 0.55
NCKAP1LP55160 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms