Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.63■□□□□ 0.57
PMS1P54277 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.63■□□□□ 0.57
PMS1P54277 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.63■□□□□ 0.57
PMS1P54277 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.63■□□□□ 0.57
PMS1P54277 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PMS1P54277 AC002310.6-201ENST00000624451 1377 ntBASIC18.63■□□□□ 0.57
PMS1P54277 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PMS1P54277 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.63■□□□□ 0.57
PMS1P54277 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.63■□□□□ 0.57
PMS1P54277 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.62■□□□□ 0.57
PMS1P54277 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.62■□□□□ 0.57
PMS1P54277 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PMS1P54277 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.62■□□□□ 0.57
PMS1P54277 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.62■□□□□ 0.57
PMS1P54277 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.62■□□□□ 0.57
PMS1P54277 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PMS1P54277 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PMS1P54277 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.62■□□□□ 0.57
PMS1P54277 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PMS1P54277 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.62■□□□□ 0.57
PMS1P54277 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.62■□□□□ 0.57
PMS1P54277 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.62■□□□□ 0.57
PMS1P54277 AC087163.2-201ENST00000457299 853 ntBASIC18.62■□□□□ 0.57
PMS1P54277 SLC25A6P2-201ENST00000497974 877 ntBASIC18.62■□□□□ 0.57
PMS1P54277 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.62■□□□□ 0.57
PMS1P54277 REXO1L3P-201ENST00000622202 1288 ntBASIC18.62■□□□□ 0.57
PMS1P54277 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.62■□□□□ 0.57
PMS1P54277 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PMS1P54277 AC006538.1-201ENST00000567905 1585 ntBASIC18.62■□□□□ 0.57
PMS1P54277 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PMS1P54277 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PMS1P54277 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.62■□□□□ 0.57
PMS1P54277 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.62■□□□□ 0.57
PMS1P54277 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.62■□□□□ 0.57
PMS1P54277 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMS1P54277 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PMS1P54277 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PMS1P54277 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PMS1P54277 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
PMS1P54277 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.61■□□□□ 0.57
PMS1P54277 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.61■□□□□ 0.57
PMS1P54277 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.61■□□□□ 0.57
PMS1P54277 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.61■□□□□ 0.57
PMS1P54277 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PMS1P54277 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.61■□□□□ 0.57
PMS1P54277 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.61■□□□□ 0.57
PMS1P54277 AC013467.2-201ENST00000605472 835 ntBASIC18.61■□□□□ 0.57
PMS1P54277 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.61■□□□□ 0.57
PMS1P54277 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.61■□□□□ 0.57
PMS1P54277 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.61■□□□□ 0.57
PMS1P54277 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PMS1P54277 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
PMS1P54277 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.61■□□□□ 0.57
PMS1P54277 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 AL671710.1-201ENST00000610245 2349 ntBASIC18.61■□□□□ 0.57
PMS1P54277 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PMS1P54277 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMS1P54277 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms