Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.452e-6■□□□□ 9.3
NCBP2P52298 IFT80-215ENST00000478370 579 ntTSL 45.95□□□□□ -1.462e-6■□□□□ 9.3
NCBP2P52298 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.462e-6■□□□□ 9.3
NCBP2P52298 IFT80-209ENST00000468327 574 ntTSL 45.88□□□□□ -1.472e-6■□□□□ 9.3
NCBP2P52298 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.522e-6■□□□□ 9.3
NCBP2P52298 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.552e-6■□□□□ 9.3
NCBP2P52298 IFT80-207ENST00000467254 764 ntTSL 24.92□□□□□ -1.622e-6■□□□□ 9.3
NCBP2P52298 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.72e-6■□□□□ 9.3
NCBP2P52298 IFT80-224ENST00000489004 610 ntTSL 54.24□□□□□ -1.732e-6■□□□□ 9.3
NCBP2P52298 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.742e-6■□□□□ 9.3
NCBP2P52298 IFT80-213ENST00000477495 766 ntTSL 54.02□□□□□ -1.772e-6■□□□□ 9.3
NCBP2P52298 IFT80-204ENST00000465537 860 ntTSL 53.74□□□□□ -1.812e-6■□□□□ 9.3
NCBP2P52298 IFT80-227ENST00000498409 719 ntTSL 53.54□□□□□ -1.842e-6■□□□□ 9.3
NCBP2P52298 IFT80-226ENST00000498145 544 ntTSL 43.25□□□□□ -1.892e-6■□□□□ 9.3
NCBP2P52298 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.892e-6■□□□□ 9.3
NCBP2P52298 IFT80-218ENST00000482317 574 ntTSL 53.22□□□□□ -1.892e-6■□□□□ 9.3
NCBP2P52298 IFT80-216ENST00000478460 591 ntTSL 42.94□□□□□ -1.942e-6■□□□□ 9.3
NCBP2P52298 IFT80-211ENST00000472773 657 ntTSL 52.62□□□□□ -1.992e-6■□□□□ 9.3
NCBP2P52298 IFT80-222ENST00000486856 539 ntTSL 42.02□□□□□ -2.092e-6■□□□□ 9.3
NCBP2P52298 IFT80-205ENST00000465972 569 ntTSL 41.97□□□□□ -2.092e-6■□□□□ 9.3
NCBP2P52298 IFT80-208ENST00000468218 567 ntTSL 41.83□□□□□ -2.122e-6■□□□□ 9.3
NCBP2P52298 NFE2L2-210ENST00000462023 521 ntTSL 214.24□□□□□ -0.139e-7■□□□□ 9.3
NCBP2P52298 MINOS1-208ENST00000498067 481 ntTSL 219.53■□□□□ 0.722e-11■□□□□ 9.2
NCBP2P52298 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.432e-11■□□□□ 9.2
NCBP2P52298 MINOS1-202ENST00000462646 335 ntTSL 316.96■□□□□ 0.312e-11■□□□□ 9.2
NCBP2P52298 MINOS1-NBL1-202ENST00000602384 999 ntTSL 516.34■□□□□ 0.212e-11■□□□□ 9.2
NCBP2P52298 MINOS1-NBL1-203ENST00000602450 590 ntTSL 216.17■□□□□ 0.182e-11■□□□□ 9.2
NCBP2P52298 MINOS1-204ENST00000479642 576 ntTSL 315.3■□□□□ 0.042e-11■□□□□ 9.2
NCBP2P52298 MINOS1-NBL1-201ENST00000602293 820 ntTSL 314.11□□□□□ -0.152e-11■□□□□ 9.2
NCBP2P52298 MINOS1-209ENST00000498642 669 ntTSL 213.87□□□□□ -0.192e-11■□□□□ 9.2
NCBP2P52298 MINOS1-205ENST00000481464 657 ntTSL 312.97□□□□□ -0.332e-11■□□□□ 9.2
NCBP2P52298 MINOS1-203ENST00000467029 583 ntTSL 212.63□□□□□ -0.392e-11■□□□□ 9.2
NCBP2P52298 MINOS1-207ENST00000486890 677 ntTSL 310.74□□□□□ -0.692e-11■□□□□ 9.2
NCBP2P52298 MINOS1-210ENST00000617872 3678 ntTSL 2 BASIC10.59□□□□□ -0.712e-11■□□□□ 9.2
NCBP2P52298 MINOS1-201ENST00000322753 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.732e-11■□□□□ 9.2
NCBP2P52298 MINOS1-206ENST00000485362 438 ntTSL 24.59□□□□□ -1.672e-11■□□□□ 9.2
NCBP2P52298 NEAT1_1.1-201ENST00000620348 120 ntBASIC10.54□□□□□ -0.722e-26■□□□□ 9.2
NCBP2P52298 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC10.96□□□□□ -0.654e-8■□□□□ 9.2
NCBP2P52298 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.744e-8■□□□□ 9.2
NCBP2P52298 PUM1-215ENST00000525948 1103 ntTSL 38.95□□□□□ -0.984e-8■□□□□ 9.2
NCBP2P52298 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.35□□□□□ -1.074e-8■□□□□ 9.2
NCBP2P52298 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.124e-8■□□□□ 9.2
NCBP2P52298 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.7□□□□□ -1.184e-8■□□□□ 9.2
NCBP2P52298 PUM1-214ENST00000525843 4528 ntTSL 57.19□□□□□ -1.264e-8■□□□□ 9.2
NCBP2P52298 PUM1-213ENST00000524516 561 ntTSL 26.69□□□□□ -1.344e-8■□□□□ 9.2
NCBP2P52298 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.44e-8■□□□□ 9.2
NCBP2P52298 PUM1-209ENST00000480602 906 ntTSL 55.99□□□□□ -1.454e-8■□□□□ 9.2
NCBP2P52298 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.87□□□□□ -1.474e-8■□□□□ 9.2
NCBP2P52298 PUM1-218ENST00000526215 586 ntTSL 25.69□□□□□ -1.54e-8■□□□□ 9.2
NCBP2P52298 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.07□□□□□ -0.322e-14■□□□□ 9.2
NCBP2P52298 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.07□□□□□ -0.322e-14■□□□□ 9.2
NCBP2P52298 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.07□□□□□ -0.322e-14■□□□□ 9.2
NCBP2P52298 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.322e-14■□□□□ 9.2
NCBP2P52298 SAT1-209ENST00000489394 1135 ntTSL 210.11□□□□□ -0.792e-14■□□□□ 9.2
NCBP2P52298 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.563e-7■□□□□ 9.2
NCBP2P52298 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.62e-27■□□□□ 9.2
NCBP2P52298 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.012e-27■□□□□ 9.2
NCBP2P52298 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.832e-27■□□□□ 9.2
NCBP2P52298 MIR4444-1-201ENST00000581696 74 ntBASIC2.93□□□□□ -1.942e-27■□□□□ 9.2
NCBP2P52298 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.617e-9■□□□□ 9.2
NCBP2P52298 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.271e-6■□□□□ 9.2
NCBP2P52298 NSUN2-203ENST00000504374 3217 ntTSL 216.01■□□□□ 0.157e-9■□□□□ 9.2
NCBP2P52298 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.077e-9■□□□□ 9.2
NCBP2P52298 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.051e-6■□□□□ 9.2
NCBP2P52298 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.413e-17■□□□□ 9.2
NCBP2P52298 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.533e-17■□□□□ 9.2
NCBP2P52298 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.543e-17■□□□□ 9.2
NCBP2P52298 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC10.59□□□□□ -0.713e-17■□□□□ 9.2
NCBP2P52298 IST1-215ENST00000538850 1125 ntTSL 3 BASIC10.27□□□□□ -0.773e-17■□□□□ 9.2
NCBP2P52298 IST1-213ENST00000538565 1245 ntTSL 29.94□□□□□ -0.823e-17■□□□□ 9.2
NCBP2P52298 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC9.93□□□□□ -0.823e-17■□□□□ 9.2
NCBP2P52298 IST1-211ENST00000537613 894 ntTSL 29.53□□□□□ -0.883e-17■□□□□ 9.2
NCBP2P52298 IST1-207ENST00000534994 674 ntTSL 59.43□□□□□ -0.93e-17■□□□□ 9.2
NCBP2P52298 IST1-216ENST00000539186 542 ntTSL 48.94□□□□□ -0.983e-17■□□□□ 9.2
NCBP2P52298 IST1-204ENST00000424485 521 ntTSL 48.46□□□□□ -1.063e-17■□□□□ 9.2
NCBP2P52298 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.37□□□□□ -1.073e-17■□□□□ 9.2
NCBP2P52298 IST1-212ENST00000538104 531 ntTSL 48.3□□□□□ -1.083e-17■□□□□ 9.2
NCBP2P52298 IST1-224ENST00000566536 612 ntTSL 28.14□□□□□ -1.113e-17■□□□□ 9.2
NCBP2P52298 IST1-220ENST00000541918 908 ntTSL 57.94□□□□□ -1.143e-17■□□□□ 9.2
NCBP2P52298 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.21□□□□□ -1.253e-17■□□□□ 9.2
NCBP2P52298 IST1-217ENST00000540296 476 ntTSL 46.6□□□□□ -1.353e-17■□□□□ 9.2
NCBP2P52298 ENOSF1-215ENST00000583771 436 ntTSL 520.98■□□□□ 0.952e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-218ENST00000584453 1230 ntTSL 520.92■□□□□ 0.942e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-210ENST00000581332 451 ntTSL 419.65■□□□□ 0.742e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.632e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-211ENST00000581475 1745 ntTSL 1 (best)16.89■□□□□ 0.292e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-206ENST00000578651 1177 ntTSL 215.86■□□□□ 0.132e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.53■□□□□ 0.082e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.15□□□□□ -0.142e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC11.85□□□□□ -0.512e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-208ENST00000580605 699 ntTSL 311.79□□□□□ -0.522e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-222ENST00000585128 1296 ntTSL 511.59□□□□□ -0.552e-6■□□□□ 9.2
NCBP2P52298 ENOSF1-221ENST00000585004 1501 ntTSL 29.26□□□□□ -0.932e-6■□□□□ 9.2
NCBP2P52298 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)10.66□□□□□ -0.74e-14■□□□□ 9.2
NCBP2P52298 EIF2AK1-203ENST00000431744 806 ntTSL 324.03■■□□□ 1.446e-9■□□□□ 9.2
NCBP2P52298 EIF2AK1-204ENST00000446699 573 ntTSL 424.03■■□□□ 1.446e-9■□□□□ 9.2
NCBP2P52298 EIF2AK1-205ENST00000461493 631 ntTSL 218.89■□□□□ 0.616e-9■□□□□ 9.2
NCBP2P52298 EIF2AK1-206ENST00000463213 791 ntTSL 214.86□□□□□ -0.036e-9■□□□□ 9.2
NCBP2P52298 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.162e-8■□□□□ 9.2
NCBP2P52298 SSBP1-207ENST00000468267 800 ntTSL 215.64■□□□□ 0.092e-8■□□□□ 9.2
Retrieved 100 of 18,329 protein–RNA pairs in 391.3 ms