Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCNKBP51801 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCNKBP51801 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLCNKBP51801 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKBP51801 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKBP51801 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKBP51801 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 PMS2P4-201ENST00000412466 1052 ntBASIC18.01■□□□□ 0.47
CLCNKBP51801 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKBP51801 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.01■□□□□ 0.47
CLCNKBP51801 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCNKBP51801 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCNKBP51801 AC069335.1-201ENST00000489972 472 ntBASIC18.01■□□□□ 0.47
CLCNKBP51801 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CLCNKBP51801 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCNKBP51801 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.01■□□□□ 0.47
CLCNKBP51801 MIR3909-201ENST00000579518 119 ntBASIC18.01■□□□□ 0.47
CLCNKBP51801 AC009093.7-201ENST00000623853 1223 ntBASIC18.01■□□□□ 0.47
CLCNKBP51801 LINC00628-201ENST00000628516 1289 ntBASIC18.01■□□□□ 0.47
CLCNKBP51801 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKBP51801 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCNKBP51801 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLCNKBP51801 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CLCNKBP51801 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKBP51801 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLCNKBP51801 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKBP51801 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCNKBP51801 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18■□□□□ 0.47
CLCNKBP51801 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 WASH6P-202ENST00000359512 1437 ntBASIC18■□□□□ 0.47
CLCNKBP51801 AC106820.2-201ENST00000563775 3264 ntBASIC18■□□□□ 0.47
CLCNKBP51801 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 SLC9A3P2-201ENST00000447821 2021 ntBASIC18■□□□□ 0.47
CLCNKBP51801 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCNKBP51801 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18■□□□□ 0.47
CLCNKBP51801 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLCNKBP51801 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CLCNKBP51801 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18■□□□□ 0.47
CLCNKBP51801 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18■□□□□ 0.47
CLCNKBP51801 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18■□□□□ 0.47
CLCNKBP51801 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18■□□□□ 0.47
CLCNKBP51801 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18■□□□□ 0.47
CLCNKBP51801 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18■□□□□ 0.47
CLCNKBP51801 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CLCNKBP51801 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLCNKBP51801 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKBP51801 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CLCNKBP51801 TUBB8P12-201ENST00000308911 1335 ntBASIC17.99■□□□□ 0.47
CLCNKBP51801 TUBB7P-202ENST00000428444 1305 ntBASIC17.99■□□□□ 0.47
CLCNKBP51801 TUBB8P7-204ENST00000567960 1332 ntBASIC17.99■□□□□ 0.47
CLCNKBP51801 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCNKBP51801 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CLCNKBP51801 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLCNKBP51801 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCNKBP51801 FAM58DP-201ENST00000428076 619 ntBASIC17.99■□□□□ 0.47
CLCNKBP51801 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCNKBP51801 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCNKBP51801 PCDHB18P-201ENST00000524813 2368 ntBASIC17.99■□□□□ 0.47
CLCNKBP51801 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCNKBP51801 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLCNKBP51801 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKBP51801 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLCNKBP51801 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms