Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 ADH5P3-201ENST00000433842 1137 ntBASIC18.66■□□□□ 0.58
GPC3P51654 METTL21AP1-201ENST00000438852 635 ntBASIC18.66■□□□□ 0.58
GPC3P51654 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 AP000344.2-201ENST00000512987 629 ntBASIC18.66■□□□□ 0.58
GPC3P51654 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.66■□□□□ 0.58
GPC3P51654 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.66■□□□□ 0.58
GPC3P51654 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.66■□□□□ 0.58
GPC3P51654 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.66■□□□□ 0.58
GPC3P51654 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.66■□□□□ 0.58
GPC3P51654 AC027612.4-201ENST00000605371 583 ntBASIC18.66■□□□□ 0.58
GPC3P51654 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 AL513210.1-201ENST00000629608 234 ntBASIC18.66■□□□□ 0.58
GPC3P51654 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
GPC3P51654 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GPC3P51654 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.66■□□□□ 0.58
GPC3P51654 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.66■□□□□ 0.58
GPC3P51654 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.66■□□□□ 0.58
GPC3P51654 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GPC3P51654 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC3P51654 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
GPC3P51654 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GPC3P51654 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
GPC3P51654 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.65■□□□□ 0.58
GPC3P51654 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC3P51654 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 AC002056.1-201ENST00000395613 760 ntBASIC18.65■□□□□ 0.58
GPC3P51654 HMGA1P7-201ENST00000406908 502 ntBASIC18.65■□□□□ 0.58
GPC3P51654 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.65■□□□□ 0.58
GPC3P51654 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GPC3P51654 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
GPC3P51654 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC3P51654 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC3P51654 AC099522.2-201ENST00000607001 744 ntBASIC18.65■□□□□ 0.58
GPC3P51654 AC105339.1-204ENST00000636249 355 ntBASIC18.65■□□□□ 0.58
GPC3P51654 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
GPC3P51654 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC3P51654 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC3P51654 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
GPC3P51654 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC3P51654 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC3P51654 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC3P51654 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC3P51654 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC3P51654 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GPC3P51654 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.64■□□□□ 0.57
GPC3P51654 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 AC012313.1-201ENST00000593393 3059 ntBASIC18.64■□□□□ 0.57
GPC3P51654 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.64■□□□□ 0.57
GPC3P51654 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.64■□□□□ 0.57
GPC3P51654 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.64■□□□□ 0.57
GPC3P51654 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
GPC3P51654 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.64■□□□□ 0.57
GPC3P51654 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.64■□□□□ 0.57
GPC3P51654 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GPC3P51654 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.64■□□□□ 0.57
GPC3P51654 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.64■□□□□ 0.57
GPC3P51654 DUX4L17-201ENST00000557360 1267 ntBASIC18.64■□□□□ 0.57
GPC3P51654 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.64■□□□□ 0.57
GPC3P51654 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.64■□□□□ 0.57
GPC3P51654 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.64■□□□□ 0.57
GPC3P51654 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GPC3P51654 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.64■□□□□ 0.57
GPC3P51654 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms