Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB5CP51148 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 AC138035.3-201ENST00000622706 2791 ntBASIC13.67□□□□□ -0.22
RAB5CP51148 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB5CP51148 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
RAB5CP51148 WWOX-216ENST00000569818 525 ntBASIC13.67□□□□□ -0.22
RAB5CP51148 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB5CP51148 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5CP51148 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5CP51148 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5CP51148 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB5CP51148 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
RAB5CP51148 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB5CP51148 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB5CP51148 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB5CP51148 AL596087.1-201ENST00000400979 1969 ntBASIC13.66□□□□□ -0.22
RAB5CP51148 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB5CP51148 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB5CP51148 MYCLP1-201ENST00000372451 1075 ntBASIC13.66□□□□□ -0.22
RAB5CP51148 KRT18P29-201ENST00000397031 1267 ntBASIC13.66□□□□□ -0.22
RAB5CP51148 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB5CP51148 HLA-J-202ENST00000469281 1241 ntBASIC13.66□□□□□ -0.22
RAB5CP51148 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB5CP51148 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB5CP51148 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB5CP51148 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.66□□□□□ -0.22
RAB5CP51148 RARRES2P6-201ENST00000567333 442 ntBASIC13.66□□□□□ -0.22
RAB5CP51148 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 AC010240.3-201ENST00000607688 395 ntBASIC13.66□□□□□ -0.22
RAB5CP51148 MIR6786-201ENST00000616843 113 ntBASIC13.66□□□□□ -0.22
RAB5CP51148 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB5CP51148 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB5CP51148 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB5CP51148 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5CP51148 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms