Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC9A3P48764 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC9A3P48764 FAM86EP-206ENST00000510506 987 ntBASIC15.61■□□□□ 0.09
SLC9A3P48764 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC9A3P48764 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC9A3P48764 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC9A3P48764 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC9A3P48764 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SLC9A3P48764 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 KRT18P1-202ENST00000452408 1331 ntBASIC15.61■□□□□ 0.09
SLC9A3P48764 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 AC132938.5-201ENST00000624980 1813 ntBASIC15.61■□□□□ 0.09
SLC9A3P48764 AC006449.5-201ENST00000610658 2098 ntBASIC15.61■□□□□ 0.09
SLC9A3P48764 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC9A3P48764 AC233702.3-201ENST00000578656 1387 ntBASIC15.61■□□□□ 0.09
SLC9A3P48764 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SLC9A3P48764 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC9A3P48764 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC9A3P48764 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
SLC9A3P48764 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC9A3P48764 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 TP73-AS1-210ENST00000637775 1455 ntBASIC15.6■□□□□ 0.09
SLC9A3P48764 AL662844.4-201ENST00000606367 2838 ntBASIC15.6■□□□□ 0.09
SLC9A3P48764 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC9A3P48764 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SLC9A3P48764 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC9A3P48764 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 TSSC2-201ENST00000450217 709 ntBASIC15.6■□□□□ 0.09
SLC9A3P48764 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.6■□□□□ 0.09
SLC9A3P48764 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.6■□□□□ 0.09
SLC9A3P48764 AL049597.2-201ENST00000565575 961 ntBASIC15.6■□□□□ 0.09
SLC9A3P48764 AP005901.3-202ENST00000581653 237 ntBASIC15.6■□□□□ 0.09
SLC9A3P48764 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
SLC9A3P48764 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.6■□□□□ 0.09
SLC9A3P48764 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.6■□□□□ 0.09
SLC9A3P48764 AC116407.4-201ENST00000623319 1061 ntBASIC15.6■□□□□ 0.09
SLC9A3P48764 AC073592.5-201ENST00000624854 528 ntBASIC15.6■□□□□ 0.09
SLC9A3P48764 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 RNF216P1-203ENST00000404404 2427 ntBASIC15.6■□□□□ 0.09
SLC9A3P48764 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC9A3P48764 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC9A3P48764 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC9A3P48764 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC9A3P48764 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC9A3P48764 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.6■□□□□ 0.09
SLC9A3P48764 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC9A3P48764 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
SLC9A3P48764 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SLC9A3P48764 GPR89P-201ENST00000407924 1495 ntBASIC15.59■□□□□ 0.09
SLC9A3P48764 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
SLC9A3P48764 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC9A3P48764 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
SLC9A3P48764 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SLC9A3P48764 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 MINOS1P3-201ENST00000457048 203 ntBASIC15.59■□□□□ 0.09
SLC9A3P48764 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC9A3P48764 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms