Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.98■□□□□ 0.31
ARCN1P48444 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ARCN1P48444 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 RPS2P1-201ENST00000434010 821 ntBASIC16.98■□□□□ 0.31
ARCN1P48444 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.98■□□□□ 0.31
ARCN1P48444 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 AL662844.1-201ENST00000546340 181 ntBASIC16.98■□□□□ 0.31
ARCN1P48444 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.98■□□□□ 0.31
ARCN1P48444 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.98■□□□□ 0.31
ARCN1P48444 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.98■□□□□ 0.31
ARCN1P48444 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.98■□□□□ 0.31
ARCN1P48444 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.98■□□□□ 0.31
ARCN1P48444 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
ARCN1P48444 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ARCN1P48444 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
ARCN1P48444 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARCN1P48444 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ARCN1P48444 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ARCN1P48444 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.97■□□□□ 0.31
ARCN1P48444 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.97■□□□□ 0.31
ARCN1P48444 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ARCN1P48444 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ARCN1P48444 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
ARCN1P48444 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.97■□□□□ 0.31
ARCN1P48444 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ARCN1P48444 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.97■□□□□ 0.31
ARCN1P48444 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 AL031284.1-201ENST00000419297 478 ntBASIC16.97■□□□□ 0.31
ARCN1P48444 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
ARCN1P48444 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 AP001005.1-201ENST00000571755 1248 ntBASIC16.97■□□□□ 0.31
ARCN1P48444 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.97■□□□□ 0.31
ARCN1P48444 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.97■□□□□ 0.31
ARCN1P48444 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.97■□□□□ 0.31
ARCN1P48444 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARCN1P48444 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
ARCN1P48444 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.96■□□□□ 0.31
ARCN1P48444 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.96■□□□□ 0.31
ARCN1P48444 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ARCN1P48444 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ARCN1P48444 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.96■□□□□ 0.31
ARCN1P48444 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ARCN1P48444 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ARCN1P48444 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.96■□□□□ 0.31
ARCN1P48444 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.96■□□□□ 0.31
ARCN1P48444 PTCHD3P3-201ENST00000403073 906 ntBASIC16.96■□□□□ 0.31
ARCN1P48444 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.96■□□□□ 0.31
ARCN1P48444 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.96■□□□□ 0.31
ARCN1P48444 AC018712.1-201ENST00000455767 687 ntBASIC16.96■□□□□ 0.31
ARCN1P48444 RNA5SP419-201ENST00000515908 135 ntBASIC16.96■□□□□ 0.31
ARCN1P48444 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.96■□□□□ 0.31
ARCN1P48444 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.96■□□□□ 0.31
ARCN1P48444 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.96■□□□□ 0.31
ARCN1P48444 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms