Protein–RNA interactions for Protein: P48163

ME1, NADP-dependent malic enzyme, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME1P48163 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ME1P48163 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.44■□□□□ 0.7
ME1P48163 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.44■□□□□ 0.7
ME1P48163 LINC00982-205ENST00000420957 435 ntBASIC19.44■□□□□ 0.7
ME1P48163 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.44■□□□□ 0.7
ME1P48163 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.44■□□□□ 0.7
ME1P48163 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.44■□□□□ 0.7
ME1P48163 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 AC092119.3-201ENST00000612618 583 ntBASIC19.44■□□□□ 0.7
ME1P48163 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ME1P48163 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.44■□□□□ 0.7
ME1P48163 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.44■□□□□ 0.7
ME1P48163 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.44■□□□□ 0.7
ME1P48163 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.44■□□□□ 0.7
ME1P48163 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ME1P48163 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
ME1P48163 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.43■□□□□ 0.7
ME1P48163 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ME1P48163 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.43■□□□□ 0.7
ME1P48163 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.43■□□□□ 0.7
ME1P48163 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.43■□□□□ 0.7
ME1P48163 DUX4L17-201ENST00000557360 1267 ntBASIC19.43■□□□□ 0.7
ME1P48163 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.43■□□□□ 0.7
ME1P48163 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 AC073592.4-201ENST00000623827 446 ntBASIC19.43■□□□□ 0.7
ME1P48163 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
ME1P48163 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 AC092364.2-201ENST00000596710 2692 ntBASIC19.43■□□□□ 0.7
ME1P48163 AC079776.2-201ENST00000641154 1609 ntBASIC19.43■□□□□ 0.7
ME1P48163 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.43■□□□□ 0.7
ME1P48163 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ME1P48163 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ME1P48163 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.42■□□□□ 0.7
ME1P48163 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.42■□□□□ 0.7
ME1P48163 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.42■□□□□ 0.7
ME1P48163 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.42■□□□□ 0.7
ME1P48163 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.42■□□□□ 0.7
ME1P48163 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ME1P48163 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.42■□□□□ 0.7
ME1P48163 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ME1P48163 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ME1P48163 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ME1P48163 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.42■□□□□ 0.7
ME1P48163 LINC02199-201ENST00000506655 2702 ntBASIC19.42■□□□□ 0.7
ME1P48163 AL021920.2-201ENST00000624828 1351 ntBASIC19.42■□□□□ 0.7
ME1P48163 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ME1P48163 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ME1P48163 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.41■□□□□ 0.7
ME1P48163 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.41■□□□□ 0.7
ME1P48163 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms