Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC6A4P31645 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC6A4P31645 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC6A4P31645 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
SLC6A4P31645 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A4P31645 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A4P31645 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLC6A4P31645 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A4P31645 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC6A4P31645 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A4P31645 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A4P31645 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SLC6A4P31645 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A4P31645 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A4P31645 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SLC6A4P31645 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC6A4P31645 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A4P31645 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC6A4P31645 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC6A4P31645 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC6A4P31645 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC6A4P31645 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 RNU1-129P-201ENST00000384064 167 ntBASIC17.32■□□□□ 0.36
SLC6A4P31645 AC002056.1-201ENST00000395613 760 ntBASIC17.32■□□□□ 0.36
SLC6A4P31645 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.32■□□□□ 0.36
SLC6A4P31645 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC6A4P31645 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC6A4P31645 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC6A4P31645 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.32■□□□□ 0.36
SLC6A4P31645 U1.21-201ENST00000580816 167 ntBASIC17.32■□□□□ 0.36
SLC6A4P31645 AL009183.1-201ENST00000603760 355 ntBASIC17.32■□□□□ 0.36
SLC6A4P31645 AL596442.2-201ENST00000610240 980 ntBASIC17.32■□□□□ 0.36
SLC6A4P31645 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC6A4P31645 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC6A4P31645 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SLC6A4P31645 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC6A4P31645 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SLC6A4P31645 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A4P31645 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC6A4P31645 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SLC6A4P31645 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A4P31645 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC6A4P31645 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC6A4P31645 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC6A4P31645 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC6A4P31645 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC6A4P31645 ACTG1P14-201ENST00000446382 1122 ntBASIC17.31■□□□□ 0.36
SLC6A4P31645 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC6A4P31645 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC6A4P31645 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC6A4P31645 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC6A4P31645 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SLC6A4P31645 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
SLC6A4P31645 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC6A4P31645 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SLC6A4P31645 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A4P31645 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A4P31645 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC6A4P31645 AC006277.1-201ENST00000624348 1610 ntBASIC17.3■□□□□ 0.36
SLC6A4P31645 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms