Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
HTR1BP28222 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.9■□□□□ 0.3
HTR1BP28222 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.9■□□□□ 0.3
HTR1BP28222 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.9■□□□□ 0.3
HTR1BP28222 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTR1BP28222 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HTR1BP28222 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HTR1BP28222 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.9■□□□□ 0.3
HTR1BP28222 AC087163.2-201ENST00000457299 853 ntBASIC16.9■□□□□ 0.3
HTR1BP28222 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.9■□□□□ 0.3
HTR1BP28222 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.9■□□□□ 0.3
HTR1BP28222 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HTR1BP28222 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HTR1BP28222 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HTR1BP28222 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTR1BP28222 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HTR1BP28222 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HTR1BP28222 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1BP28222 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HTR1BP28222 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HTR1BP28222 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HTR1BP28222 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.89■□□□□ 0.29
HTR1BP28222 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
HTR1BP28222 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.89■□□□□ 0.29
HTR1BP28222 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HTR1BP28222 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.89■□□□□ 0.29
HTR1BP28222 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.89■□□□□ 0.29
HTR1BP28222 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.29
HTR1BP28222 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.89■□□□□ 0.29
HTR1BP28222 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.89■□□□□ 0.29
HTR1BP28222 KRT19P2-202ENST00000557173 1012 ntBASIC16.89■□□□□ 0.29
HTR1BP28222 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.89■□□□□ 0.29
HTR1BP28222 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.89■□□□□ 0.29
HTR1BP28222 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HTR1BP28222 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.89■□□□□ 0.29
HTR1BP28222 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HTR1BP28222 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.89■□□□□ 0.29
HTR1BP28222 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1BP28222 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HTR1BP28222 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HTR1BP28222 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HTR1BP28222 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HTR1BP28222 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.88■□□□□ 0.29
HTR1BP28222 AC016396.2-201ENST00000562575 1417 ntBASIC16.88■□□□□ 0.29
HTR1BP28222 AC025580.3-201ENST00000617932 1424 ntBASIC16.88■□□□□ 0.29
HTR1BP28222 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
HTR1BP28222 RPS8P6-201ENST00000426177 609 ntBASIC16.88■□□□□ 0.29
HTR1BP28222 MKNK2P1-201ENST00000437526 628 ntBASIC16.88■□□□□ 0.29
HTR1BP28222 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.88■□□□□ 0.29
HTR1BP28222 FAM185BP-201ENST00000443595 716 ntBASIC16.88■□□□□ 0.29
HTR1BP28222 AC074386.1-202ENST00000463561 864 ntBASIC16.88■□□□□ 0.29
HTR1BP28222 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 AC134684.3-201ENST00000641758 218 ntBASIC16.88■□□□□ 0.29
HTR1BP28222 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 AC046158.3-201ENST00000624947 2558 ntBASIC16.88■□□□□ 0.29
HTR1BP28222 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.88■□□□□ 0.29
HTR1BP28222 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms