Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCL1P22362 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL1P22362 PCDH8P1-201ENST00000428983 2773 ntBASIC14.57□□□□□ -0.08
CCL1P22362 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL1P22362 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 ARMC10P1-201ENST00000313754 855 ntBASIC14.57□□□□□ -0.08
CCL1P22362 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CCL1P22362 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.57□□□□□ -0.08
CCL1P22362 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.57□□□□□ -0.08
CCL1P22362 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 AC087163.2-201ENST00000457299 853 ntBASIC14.57□□□□□ -0.08
CCL1P22362 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 KRT18P31-201ENST00000506277 1292 ntBASIC14.57□□□□□ -0.08
CCL1P22362 SART3-203ENST00000546611 1184 ntBASIC14.57□□□□□ -0.08
CCL1P22362 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 AC091167.2-201ENST00000579581 588 ntBASIC14.57□□□□□ -0.08
CCL1P22362 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 AL121772.3-201ENST00000610840 674 ntBASIC14.57□□□□□ -0.08
CCL1P22362 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CCL1P22362 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 AC002310.6-201ENST00000624451 1377 ntBASIC14.57□□□□□ -0.08
CCL1P22362 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL1P22362 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL1P22362 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CCL1P22362 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL1P22362 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL1P22362 AL662844.4-201ENST00000606367 2838 ntBASIC14.56□□□□□ -0.08
CCL1P22362 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCL1P22362 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL1P22362 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 AC022188.1-201ENST00000620960 1664 ntBASIC14.56□□□□□ -0.08
CCL1P22362 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL1P22362 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL1P22362 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.56□□□□□ -0.08
CCL1P22362 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL1P22362 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL1P22362 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.56□□□□□ -0.08
CCL1P22362 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCL1P22362 MTDHP4-201ENST00000600287 670 ntBASIC14.56□□□□□ -0.08
CCL1P22362 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL1P22362 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CCL1P22362 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CCL1P22362 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL1P22362 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CCL1P22362 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL1P22362 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.55□□□□□ -0.08
CCL1P22362 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL1P22362 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms