Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.95■□□□□ 0.3
XRCC1P18887 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.95■□□□□ 0.3
XRCC1P18887 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.95■□□□□ 0.3
XRCC1P18887 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
XRCC1P18887 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
XRCC1P18887 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
XRCC1P18887 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.94■□□□□ 0.3
XRCC1P18887 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.94■□□□□ 0.3
XRCC1P18887 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.94■□□□□ 0.3
XRCC1P18887 AC136632.2-201ENST00000512891 861 ntBASIC16.94■□□□□ 0.3
XRCC1P18887 RNA5SP415-201ENST00000517246 115 ntBASIC16.94■□□□□ 0.3
XRCC1P18887 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
XRCC1P18887 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 AC005915.1-201ENST00000624912 2018 ntBASIC16.94■□□□□ 0.3
XRCC1P18887 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
XRCC1P18887 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC1P18887 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
XRCC1P18887 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 KRT18P58-201ENST00000527480 1120 ntBASIC16.93■□□□□ 0.3
XRCC1P18887 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.93■□□□□ 0.3
XRCC1P18887 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.93■□□□□ 0.3
XRCC1P18887 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
XRCC1P18887 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 AL139424.1-201ENST00000607572 797 ntBASIC16.93■□□□□ 0.3
XRCC1P18887 AC117500.6-201ENST00000624871 588 ntBASIC16.93■□□□□ 0.3
XRCC1P18887 AL391005.1-201ENST00000623953 2435 ntBASIC16.93■□□□□ 0.3
XRCC1P18887 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
XRCC1P18887 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
XRCC1P18887 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.93■□□□□ 0.3
XRCC1P18887 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.93■□□□□ 0.3
XRCC1P18887 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
XRCC1P18887 AC097637.2-201ENST00000624096 1997 ntBASIC16.93■□□□□ 0.3
XRCC1P18887 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.93■□□□□ 0.3
XRCC1P18887 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC1P18887 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms