Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.7■□□□□ 0.58
SMPD1P17405 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.7■□□□□ 0.58
SMPD1P17405 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMPD1P17405 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMPD1P17405 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.7■□□□□ 0.58
SMPD1P17405 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.7■□□□□ 0.58
SMPD1P17405 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.7■□□□□ 0.58
SMPD1P17405 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.7■□□□□ 0.58
SMPD1P17405 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMPD1P17405 LINC02012-201ENST00000608206 1725 ntBASIC18.7■□□□□ 0.58
SMPD1P17405 AC007967.4-201ENST00000614700 386 ntBASIC18.7■□□□□ 0.58
SMPD1P17405 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMPD1P17405 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.7■□□□□ 0.58
SMPD1P17405 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.7■□□□□ 0.58
SMPD1P17405 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMPD1P17405 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMPD1P17405 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
SMPD1P17405 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMPD1P17405 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMPD1P17405 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SMPD1P17405 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.69■□□□□ 0.58
SMPD1P17405 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.69■□□□□ 0.58
SMPD1P17405 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMPD1P17405 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.69■□□□□ 0.58
SMPD1P17405 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.69■□□□□ 0.58
SMPD1P17405 PRYP6-201ENST00000514804 343 ntBASIC18.69■□□□□ 0.58
SMPD1P17405 AP005018.1-201ENST00000525475 301 ntBASIC18.69■□□□□ 0.58
SMPD1P17405 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.69■□□□□ 0.58
SMPD1P17405 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.69■□□□□ 0.58
SMPD1P17405 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.69■□□□□ 0.58
SMPD1P17405 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.69■□□□□ 0.58
SMPD1P17405 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.69■□□□□ 0.58
SMPD1P17405 AL138828.2-201ENST00000615812 383 ntBASIC18.69■□□□□ 0.58
SMPD1P17405 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SMPD1P17405 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SMPD1P17405 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMPD1P17405 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.69■□□□□ 0.58
SMPD1P17405 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.69■□□□□ 0.58
SMPD1P17405 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMPD1P17405 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.68■□□□□ 0.58
SMPD1P17405 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.68■□□□□ 0.58
SMPD1P17405 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMPD1P17405 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.68■□□□□ 0.58
SMPD1P17405 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 CRB3P1-201ENST00000449338 276 ntBASIC18.68■□□□□ 0.58
SMPD1P17405 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.68■□□□□ 0.58
SMPD1P17405 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.68■□□□□ 0.58
SMPD1P17405 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.68■□□□□ 0.58
SMPD1P17405 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.68■□□□□ 0.58
SMPD1P17405 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.68■□□□□ 0.58
SMPD1P17405 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.68■□□□□ 0.58
SMPD1P17405 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMPD1P17405 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 AC092053.1-201ENST00000605787 1936 ntBASIC18.68■□□□□ 0.58
SMPD1P17405 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SMPD1P17405 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMPD1P17405 CROCCP2-202ENST00000412962 2773 ntBASIC18.68■□□□□ 0.58
SMPD1P17405 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.68■□□□□ 0.58
SMPD1P17405 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMPD1P17405 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.67■□□□□ 0.58
SMPD1P17405 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms