Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TIMP2P16035 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TIMP2P16035 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 AC006277.1-201ENST00000624348 1610 ntBASIC16.84■□□□□ 0.29
TIMP2P16035 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TIMP2P16035 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.84■□□□□ 0.29
TIMP2P16035 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP2P16035 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.83■□□□□ 0.28
TIMP2P16035 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.83■□□□□ 0.28
TIMP2P16035 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMP2P16035 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMP2P16035 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.83■□□□□ 0.28
TIMP2P16035 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TIMP2P16035 AC013467.2-201ENST00000605472 835 ntBASIC16.83■□□□□ 0.28
TIMP2P16035 AL031055.1-201ENST00000606362 631 ntBASIC16.83■□□□□ 0.28
TIMP2P16035 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMP2P16035 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TIMP2P16035 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TIMP2P16035 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP2P16035 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.82■□□□□ 0.28
TIMP2P16035 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.82■□□□□ 0.28
TIMP2P16035 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.82■□□□□ 0.28
TIMP2P16035 AC254562.1-201ENST00000417586 456 ntBASIC16.82■□□□□ 0.28
TIMP2P16035 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.82■□□□□ 0.28
TIMP2P16035 ADH5P3-201ENST00000433842 1137 ntBASIC16.82■□□□□ 0.28
TIMP2P16035 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMP2P16035 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.82■□□□□ 0.28
TIMP2P16035 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 AC109635.5-201ENST00000533593 962 ntBASIC16.82■□□□□ 0.28
TIMP2P16035 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMP2P16035 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMP2P16035 NIFKP4-201ENST00000567275 1192 ntBASIC16.82■□□□□ 0.28
TIMP2P16035 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMP2P16035 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMP2P16035 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 AC105339.1-204ENST00000636249 355 ntBASIC16.82■□□□□ 0.28
TIMP2P16035 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.82■□□□□ 0.28
TIMP2P16035 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TIMP2P16035 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP2P16035 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP2P16035 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TIMP2P16035 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP2P16035 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP2P16035 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP2P16035 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP2P16035 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP2P16035 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP2P16035 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP2P16035 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TIMP2P16035 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TIMP2P16035 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP2P16035 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP2P16035 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TIMP2P16035 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TIMP2P16035 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TIMP2P16035 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms