Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COL11A2P13942 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.39■□□□□ 0.85
COL11A2P13942 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.39■□□□□ 0.85
COL11A2P13942 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
COL11A2P13942 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL11A2P13942 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.38■□□□□ 0.85
COL11A2P13942 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.38■□□□□ 0.85
COL11A2P13942 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
COL11A2P13942 FAM86MP-201ENST00000340703 885 ntBASIC20.38■□□□□ 0.85
COL11A2P13942 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
COL11A2P13942 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.38■□□□□ 0.85
COL11A2P13942 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.38■□□□□ 0.85
COL11A2P13942 AC092658.1-201ENST00000505836 891 ntBASIC20.38■□□□□ 0.85
COL11A2P13942 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL11A2P13942 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.38■□□□□ 0.85
COL11A2P13942 MIR4525-201ENST00000580000 75 ntBASIC20.38■□□□□ 0.85
COL11A2P13942 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.38■□□□□ 0.85
COL11A2P13942 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.38■□□□□ 0.85
COL11A2P13942 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.38■□□□□ 0.85
COL11A2P13942 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A2P13942 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 SLC25A6P5-201ENST00000435663 894 ntBASIC20.37■□□□□ 0.85
COL11A2P13942 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.37■□□□□ 0.85
COL11A2P13942 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 AC004461.2-201ENST00000629517 803 ntBASIC20.37■□□□□ 0.85
COL11A2P13942 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.37■□□□□ 0.85
COL11A2P13942 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
COL11A2P13942 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.37■□□□□ 0.85
COL11A2P13942 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
COL11A2P13942 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.37■□□□□ 0.85
COL11A2P13942 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A2P13942 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 NOC2LP1-202ENST00000452600 2235 ntBASIC20.36■□□□□ 0.85
COL11A2P13942 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.36■□□□□ 0.85
COL11A2P13942 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 AC234783.1-201ENST00000441761 496 ntBASIC20.36■□□□□ 0.85
COL11A2P13942 AC093724.1-201ENST00000448659 1027 ntBASIC20.36■□□□□ 0.85
COL11A2P13942 AC022210.1-201ENST00000449856 793 ntBASIC20.36■□□□□ 0.85
COL11A2P13942 AC124947.2-201ENST00000547118 1133 ntBASIC20.36■□□□□ 0.85
COL11A2P13942 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
COL11A2P13942 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.36■□□□□ 0.85
COL11A2P13942 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.36■□□□□ 0.85
COL11A2P13942 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.36■□□□□ 0.85
COL11A2P13942 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.36■□□□□ 0.85
COL11A2P13942 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
COL11A2P13942 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.36■□□□□ 0.85
COL11A2P13942 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.36■□□□□ 0.85
COL11A2P13942 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.36■□□□□ 0.85
COL11A2P13942 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.36■□□□□ 0.85
COL11A2P13942 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.36■□□□□ 0.85
COL11A2P13942 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.36■□□□□ 0.85
COL11A2P13942 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.36■□□□□ 0.85
COL11A2P13942 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A2P13942 AC004408.2-201ENST00000623613 2777 ntBASIC20.35■□□□□ 0.85
COL11A2P13942 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A2P13942 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COL11A2P13942 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A2P13942 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL11A2P13942 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.35■□□□□ 0.85
COL11A2P13942 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
COL11A2P13942 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A2P13942 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.35■□□□□ 0.85
COL11A2P13942 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms