Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
MS4A1P11836 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 SCARNA2-201ENST00000458748 420 ntBASIC21.79■■□□□ 1.08
MS4A1P11836 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.79■■□□□ 1.08
MS4A1P11836 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.79■■□□□ 1.08
MS4A1P11836 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
MS4A1P11836 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.79■■□□□ 1.08
MS4A1P11836 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.79■■□□□ 1.08
MS4A1P11836 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
MS4A1P11836 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
MS4A1P11836 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.79■■□□□ 1.08
MS4A1P11836 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
MS4A1P11836 AL513523.2-202ENST00000427283 2040 ntBASIC21.79■■□□□ 1.08
MS4A1P11836 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MS4A1P11836 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.78■■□□□ 1.08
MS4A1P11836 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.78■■□□□ 1.08
MS4A1P11836 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.78■■□□□ 1.08
MS4A1P11836 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.78■■□□□ 1.08
MS4A1P11836 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.78■■□□□ 1.08
MS4A1P11836 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.78■■□□□ 1.08
MS4A1P11836 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
MS4A1P11836 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.78■■□□□ 1.08
MS4A1P11836 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.78■■□□□ 1.08
MS4A1P11836 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 REXO1L6P-202ENST00000619970 1078 ntBASIC21.78■■□□□ 1.08
MS4A1P11836 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC21.78■■□□□ 1.08
MS4A1P11836 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
MS4A1P11836 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MS4A1P11836 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 AC092171.3-201ENST00000610122 2651 ntBASIC21.77■■□□□ 1.08
MS4A1P11836 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
MS4A1P11836 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.77■■□□□ 1.08
MS4A1P11836 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.77■■□□□ 1.08
MS4A1P11836 FGFR3P6-201ENST00000457012 610 ntBASIC21.77■■□□□ 1.08
MS4A1P11836 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.77■■□□□ 1.08
MS4A1P11836 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.77■■□□□ 1.08
MS4A1P11836 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.77■■□□□ 1.08
MS4A1P11836 AC139887.3-201ENST00000568585 713 ntBASIC21.77■■□□□ 1.08
MS4A1P11836 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.77■■□□□ 1.08
MS4A1P11836 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.77■■□□□ 1.08
MS4A1P11836 AC064862.7-201ENST00000604520 867 ntBASIC21.77■■□□□ 1.08
MS4A1P11836 AC008608.2-201ENST00000606089 416 ntBASIC21.77■■□□□ 1.08
MS4A1P11836 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
MS4A1P11836 AL139424.1-201ENST00000607572 797 ntBASIC21.77■■□□□ 1.08
MS4A1P11836 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
MS4A1P11836 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.77■■□□□ 1.08
MS4A1P11836 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.77■■□□□ 1.08
MS4A1P11836 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MS4A1P11836 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.77■■□□□ 1.07
MS4A1P11836 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC21.77■■□□□ 1.07
MS4A1P11836 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.77■■□□□ 1.07
MS4A1P11836 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms