Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.89■□□□□ 0.77
TOP1P11387 AC124067.4-201ENST00000519691 2379 ntBASIC19.89■□□□□ 0.77
TOP1P11387 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TOP1P11387 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.89■□□□□ 0.77
TOP1P11387 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.89■□□□□ 0.77
TOP1P11387 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.89■□□□□ 0.77
TOP1P11387 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.89■□□□□ 0.77
TOP1P11387 PDPK2P-202ENST00000562415 1191 ntBASIC19.89■□□□□ 0.77
TOP1P11387 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
TOP1P11387 AC010327.4-202ENST00000591484 748 ntBASIC19.89■□□□□ 0.77
TOP1P11387 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.89■□□□□ 0.77
TOP1P11387 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TOP1P11387 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.88■□□□□ 0.77
TOP1P11387 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
TOP1P11387 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
TOP1P11387 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TOP1P11387 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 RPSAP43-201ENST00000402237 625 ntBASIC19.88■□□□□ 0.77
TOP1P11387 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.88■□□□□ 0.77
TOP1P11387 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.88■□□□□ 0.77
TOP1P11387 AL513480.1-201ENST00000451731 511 ntBASIC19.88■□□□□ 0.77
TOP1P11387 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.88■□□□□ 0.77
TOP1P11387 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
TOP1P11387 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TOP1P11387 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.88■□□□□ 0.77
TOP1P11387 DUX4L17-201ENST00000557360 1267 ntBASIC19.88■□□□□ 0.77
TOP1P11387 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.88■□□□□ 0.77
TOP1P11387 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TOP1P11387 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
TOP1P11387 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TOP1P11387 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP1P11387 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
TOP1P11387 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.87■□□□□ 0.77
TOP1P11387 AC112482.1-201ENST00000492080 688 ntBASIC19.87■□□□□ 0.77
TOP1P11387 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.87■□□□□ 0.77
TOP1P11387 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.87■□□□□ 0.77
TOP1P11387 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TOP1P11387 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.87■□□□□ 0.77
TOP1P11387 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 GPALPP1-207ENST00000611650 899 ntBASIC19.87■□□□□ 0.77
TOP1P11387 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.87■□□□□ 0.77
TOP1P11387 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.87■□□□□ 0.77
TOP1P11387 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP1P11387 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.87■□□□□ 0.77
TOP1P11387 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms