Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNB1P11230 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHRNB1P11230 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNB1P11230 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNB1P11230 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHRNB1P11230 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNB1P11230 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHRNB1P11230 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNB1P11230 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHRNB1P11230 LINC00304-203ENST00000565008 1864 ntBASIC17.12■□□□□ 0.33
CHRNB1P11230 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 AC090164.3-201ENST00000610780 2143 ntBASIC17.11■□□□□ 0.33
CHRNB1P11230 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CHRNB1P11230 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHRNB1P11230 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNB1P11230 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.11■□□□□ 0.33
CHRNB1P11230 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 CR383656.12-201ENST00000549567 513 ntBASIC17.11■□□□□ 0.33
CHRNB1P11230 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 AL031055.1-201ENST00000606362 631 ntBASIC17.11■□□□□ 0.33
CHRNB1P11230 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNB1P11230 AL358472.5-202ENST00000641448 1267 ntBASIC17.11■□□□□ 0.33
CHRNB1P11230 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHRNB1P11230 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHRNB1P11230 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CHRNB1P11230 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHRNB1P11230 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 AC141586.5-201ENST00000624546 2050 ntBASIC17.11■□□□□ 0.33
CHRNB1P11230 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNB1P11230 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNB1P11230 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNB1P11230 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNB1P11230 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB1P11230 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHRNB1P11230 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNB1P11230 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.1■□□□□ 0.33
CHRNB1P11230 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.1■□□□□ 0.33
CHRNB1P11230 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB1P11230 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.1■□□□□ 0.33
CHRNB1P11230 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB1P11230 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNB1P11230 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHRNB1P11230 MIR3909-201ENST00000579518 119 ntBASIC17.1■□□□□ 0.33
CHRNB1P11230 SPDYE22P-201ENST00000582158 798 ntBASIC17.1■□□□□ 0.33
CHRNB1P11230 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB1P11230 AC027307.3-201ENST00000594262 1100 ntBASIC17.1■□□□□ 0.33
CHRNB1P11230 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.1■□□□□ 0.33
CHRNB1P11230 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB1P11230 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHRNB1P11230 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNB1P11230 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB1P11230 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHRNB1P11230 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHRNB1P11230 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB1P11230 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB1P11230 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB1P11230 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHRNB1P11230 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CHRNB1P11230 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB1P11230 PIN1P1-201ENST00000412108 996 ntBASIC17.09■□□□□ 0.33
CHRNB1P11230 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB1P11230 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB1P11230 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB1P11230 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.09■□□□□ 0.33
CHRNB1P11230 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms