Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.62■□□□□ 0.57
EPB41P11171 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB41P11171 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.62■□□□□ 0.57
EPB41P11171 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.62■□□□□ 0.57
EPB41P11171 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPB41P11171 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPB41P11171 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPB41P11171 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB41P11171 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPB41P11171 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
EPB41P11171 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EPB41P11171 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 FLJ38576-201ENST00000623820 2459 ntBASIC18.61■□□□□ 0.57
EPB41P11171 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.61■□□□□ 0.57
EPB41P11171 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 LAGE3P1-201ENST00000425356 484 ntBASIC18.61■□□□□ 0.57
EPB41P11171 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.61■□□□□ 0.57
EPB41P11171 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.61■□□□□ 0.57
EPB41P11171 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.61■□□□□ 0.57
EPB41P11171 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EPB41P11171 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
EPB41P11171 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.61■□□□□ 0.57
EPB41P11171 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
EPB41P11171 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
EPB41P11171 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
EPB41P11171 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPB41P11171 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB41P11171 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
EPB41P11171 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
EPB41P11171 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.6■□□□□ 0.57
EPB41P11171 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.6■□□□□ 0.57
EPB41P11171 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
EPB41P11171 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.6■□□□□ 0.57
EPB41P11171 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EPB41P11171 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
EPB41P11171 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.6■□□□□ 0.57
EPB41P11171 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.6■□□□□ 0.57
EPB41P11171 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.6■□□□□ 0.57
EPB41P11171 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.6■□□□□ 0.57
EPB41P11171 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.6■□□□□ 0.57
EPB41P11171 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EPB41P11171 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EPB41P11171 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB41P11171 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.59■□□□□ 0.57
EPB41P11171 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EPB41P11171 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
EPB41P11171 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EPB41P11171 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
EPB41P11171 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.59■□□□□ 0.57
EPB41P11171 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB41P11171 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.59■□□□□ 0.57
EPB41P11171 DUSP5P1-201ENST00000441325 1139 ntBASIC18.59■□□□□ 0.57
EPB41P11171 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.59■□□□□ 0.57
EPB41P11171 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.59■□□□□ 0.57
EPB41P11171 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.59■□□□□ 0.57
EPB41P11171 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.59■□□□□ 0.57
EPB41P11171 AC073648.2-201ENST00000510116 352 ntBASIC18.59■□□□□ 0.57
EPB41P11171 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.59■□□□□ 0.57
EPB41P11171 AC006557.2-201ENST00000592985 1240 ntBASIC18.59■□□□□ 0.57
EPB41P11171 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms