Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.37■□□□□ 0.05
FREM3P0C091 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.37■□□□□ 0.05
FREM3P0C091 AC027612.4-201ENST00000605371 583 ntBASIC15.37■□□□□ 0.05
FREM3P0C091 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 UBALD1-205ENST00000590891 2641 ntBASIC15.36■□□□□ 0.05
FREM3P0C091 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
FREM3P0C091 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.36■□□□□ 0.05
FREM3P0C091 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
FREM3P0C091 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.36■□□□□ 0.05
FREM3P0C091 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 AC254562.1-201ENST00000417586 456 ntBASIC15.36■□□□□ 0.05
FREM3P0C091 AC112482.1-201ENST00000492080 688 ntBASIC15.36■□□□□ 0.05
FREM3P0C091 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.36■□□□□ 0.05
FREM3P0C091 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
FREM3P0C091 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.36■□□□□ 0.05
FREM3P0C091 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.36■□□□□ 0.05
FREM3P0C091 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.36■□□□□ 0.05
FREM3P0C091 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
FREM3P0C091 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.36■□□□□ 0.05
FREM3P0C091 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FREM3P0C091 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.36■□□□□ 0.05
FREM3P0C091 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
FREM3P0C091 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.36■□□□□ 0.05
FREM3P0C091 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
FREM3P0C091 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.35■□□□□ 0.05
FREM3P0C091 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 KRT18P32-201ENST00000424695 1287 ntBASIC15.35■□□□□ 0.05
FREM3P0C091 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.35■□□□□ 0.05
FREM3P0C091 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.35■□□□□ 0.05
FREM3P0C091 AC099522.2-201ENST00000607001 744 ntBASIC15.35■□□□□ 0.05
FREM3P0C091 C20orf181-201ENST00000623918 480 ntBASIC15.35■□□□□ 0.05
FREM3P0C091 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 AC079328.2-201ENST00000561241 3354 ntBASIC15.35■□□□□ 0.05
FREM3P0C091 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
FREM3P0C091 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.35■□□□□ 0.05
FREM3P0C091 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 ELL2P1-201ENST00000413990 1906 ntBASIC15.35■□□□□ 0.05
FREM3P0C091 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.35■□□□□ 0.05
FREM3P0C091 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
FREM3P0C091 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
FREM3P0C091 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.35■□□□□ 0.05
FREM3P0C091 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 AC025580.3-201ENST00000617932 1424 ntBASIC15.35■□□□□ 0.05
FREM3P0C091 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
FREM3P0C091 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.35■□□□□ 0.05
FREM3P0C091 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.35■□□□□ 0.05
FREM3P0C091 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.35■□□□□ 0.05
FREM3P0C091 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
FREM3P0C091 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FREM3P0C091 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
FREM3P0C091 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.34■□□□□ 0.05
FREM3P0C091 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.34■□□□□ 0.05
FREM3P0C091 GPX1P2-201ENST00000429271 606 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.34■□□□□ 0.05
FREM3P0C091 HMGN1P19-201ENST00000436976 333 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 SPDYE11-202ENST00000450699 704 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 SPDYE9P-201ENST00000570642 692 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 AP001160.2-201ENST00000596071 487 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 SPDYE10P-202ENST00000612005 668 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 SPDYE8P-202ENST00000612377 668 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 AC005915.1-201ENST00000624912 2018 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FREM3P0C091 AC092919.2-201ENST00000623631 1645 ntBASIC15.34■□□□□ 0.05
FREM3P0C091 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.34■□□□□ 0.05
FREM3P0C091 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms