Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM3P06753 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM3P06753 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM3P06753 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TPM3P06753 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TPM3P06753 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.07■□□□□ 0.64
TPM3P06753 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM3P06753 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TPM3P06753 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 MIR4497-201ENST00000583208 89 ntBASIC19.07■□□□□ 0.64
TPM3P06753 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
TPM3P06753 AL138966.2-201ENST00000621997 464 ntBASIC19.07■□□□□ 0.64
TPM3P06753 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM3P06753 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TPM3P06753 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM3P06753 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM3P06753 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TPM3P06753 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TPM3P06753 AC023824.1-201ENST00000562945 2975 ntBASIC19.06■□□□□ 0.64
TPM3P06753 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TPM3P06753 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM3P06753 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TPM3P06753 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM3P06753 AC111152.3-201ENST00000569699 673 ntBASIC19.06■□□□□ 0.64
TPM3P06753 AC109462.3-201ENST00000573934 613 ntBASIC19.06■□□□□ 0.64
TPM3P06753 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.06■□□□□ 0.64
TPM3P06753 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TPM3P06753 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TPM3P06753 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TPM3P06753 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC19.06■□□□□ 0.64
TPM3P06753 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TPM3P06753 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TPM3P06753 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM3P06753 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TPM3P06753 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM3P06753 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 STARP1-201ENST00000397973 869 ntBASIC19.05■□□□□ 0.64
TPM3P06753 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TPM3P06753 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.05■□□□□ 0.64
TPM3P06753 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.05■□□□□ 0.64
TPM3P06753 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TPM3P06753 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.05■□□□□ 0.64
TPM3P06753 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.05■□□□□ 0.64
TPM3P06753 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM3P06753 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TPM3P06753 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.05■□□□□ 0.64
TPM3P06753 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
TPM3P06753 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TPM3P06753 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM3P06753 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.04■□□□□ 0.64
TPM3P06753 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.04■□□□□ 0.64
TPM3P06753 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms