Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.73■□□□□ 0.59
LGR5O75473 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.73■□□□□ 0.59
LGR5O75473 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LGR5O75473 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.73■□□□□ 0.59
LGR5O75473 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.73■□□□□ 0.59
LGR5O75473 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.73■□□□□ 0.59
LGR5O75473 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.73■□□□□ 0.59
LGR5O75473 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.73■□□□□ 0.59
LGR5O75473 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.73■□□□□ 0.59
LGR5O75473 AC084121.4-201ENST00000641598 221 ntBASIC18.73■□□□□ 0.59
LGR5O75473 AF228730.8-201ENST00000642140 221 ntBASIC18.73■□□□□ 0.59
LGR5O75473 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LGR5O75473 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.73■□□□□ 0.59
LGR5O75473 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.73■□□□□ 0.59
LGR5O75473 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LGR5O75473 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LGR5O75473 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LGR5O75473 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 TUBB8P12-201ENST00000308911 1335 ntBASIC18.73■□□□□ 0.59
LGR5O75473 TUBB7P-202ENST00000428444 1305 ntBASIC18.73■□□□□ 0.59
LGR5O75473 TUBB8P7-204ENST00000567960 1332 ntBASIC18.73■□□□□ 0.59
LGR5O75473 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.73■□□□□ 0.59
LGR5O75473 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LGR5O75473 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.72■□□□□ 0.59
LGR5O75473 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LGR5O75473 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LGR5O75473 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 FAM58DP-201ENST00000428076 619 ntBASIC18.72■□□□□ 0.59
LGR5O75473 AC005237.2-201ENST00000434368 219 ntBASIC18.72■□□□□ 0.59
LGR5O75473 AC067863.1-201ENST00000494933 530 ntBASIC18.72■□□□□ 0.59
LGR5O75473 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.72■□□□□ 0.59
LGR5O75473 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.72■□□□□ 0.59
LGR5O75473 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LGR5O75473 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.72■□□□□ 0.59
LGR5O75473 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LGR5O75473 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 LINC00895-201ENST00000629028 1637 ntBASIC18.71■□□□□ 0.59
LGR5O75473 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LGR5O75473 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LGR5O75473 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.71■□□□□ 0.59
LGR5O75473 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.71■□□□□ 0.59
LGR5O75473 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.71■□□□□ 0.59
LGR5O75473 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.71■□□□□ 0.59
LGR5O75473 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.71■□□□□ 0.59
LGR5O75473 KRT8P23-201ENST00000560090 1207 ntBASIC18.71■□□□□ 0.59
LGR5O75473 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.71■□□□□ 0.59
LGR5O75473 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.71■□□□□ 0.59
LGR5O75473 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.71■□□□□ 0.59
LGR5O75473 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.71■□□□□ 0.59
LGR5O75473 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LGR5O75473 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.71■□□□□ 0.59
LGR5O75473 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.71■□□□□ 0.59
LGR5O75473 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGR5O75473 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
LGR5O75473 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms