Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM3O75382 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 AL022342.1-201ENST00000400363 863 ntBASIC15.87■□□□□ 0.13
TRIM3O75382 KRT18P27-201ENST00000427733 1299 ntBASIC15.87■□□□□ 0.13
TRIM3O75382 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM3O75382 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM3O75382 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM3O75382 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 AC006557.2-201ENST00000592985 1240 ntBASIC15.87■□□□□ 0.13
TRIM3O75382 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM3O75382 AL139327.4-201ENST00000612362 153 ntBASIC15.87■□□□□ 0.13
TRIM3O75382 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
TRIM3O75382 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRIM3O75382 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM3O75382 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM3O75382 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 NCF1C-201ENST00000438382 1427 ntBASIC15.86■□□□□ 0.13
TRIM3O75382 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.86■□□□□ 0.13
TRIM3O75382 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM3O75382 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
TRIM3O75382 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM3O75382 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM3O75382 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM3O75382 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM3O75382 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.86■□□□□ 0.13
TRIM3O75382 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM3O75382 AC004706.3-202ENST00000621574 984 ntBASIC15.86■□□□□ 0.13
TRIM3O75382 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM3O75382 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 AC008894.3-201ENST00000624324 3103 ntBASIC15.86■□□□□ 0.13
TRIM3O75382 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRIM3O75382 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM3O75382 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM3O75382 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM3O75382 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 AC103702.1-201ENST00000548801 2630 ntBASIC15.85■□□□□ 0.13
TRIM3O75382 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRIM3O75382 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 DOC2GP-204ENST00000639052 2548 ntBASIC15.85■□□□□ 0.13
TRIM3O75382 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM3O75382 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM3O75382 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM3O75382 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM3O75382 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM3O75382 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 IGHV3-22-201ENST00000520721 359 ntBASIC15.85■□□□□ 0.13
TRIM3O75382 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM3O75382 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms