Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ3O43525 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ3O43525 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.58■■□□□ 1.05
KCNQ3O43525 AL035633.1-201ENST00000406139 838 ntBASIC21.58■■□□□ 1.05
KCNQ3O43525 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
KCNQ3O43525 TREML5P-201ENST00000421694 576 ntBASIC21.58■■□□□ 1.05
KCNQ3O43525 AC142381.1-201ENST00000426099 345 ntBASIC21.58■■□□□ 1.05
KCNQ3O43525 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.58■■□□□ 1.05
KCNQ3O43525 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KCNQ3O43525 KLF2P3-201ENST00000451977 1087 ntBASIC21.58■■□□□ 1.05
KCNQ3O43525 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
KCNQ3O43525 AC093214.1-201ENST00000511688 1107 ntBASIC21.58■■□□□ 1.05
KCNQ3O43525 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.58■■□□□ 1.05
KCNQ3O43525 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ3O43525 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
KCNQ3O43525 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ3O43525 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNQ3O43525 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.58■■□□□ 1.04
KCNQ3O43525 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ3O43525 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ3O43525 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
KCNQ3O43525 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ3O43525 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ3O43525 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ3O43525 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.58■■□□□ 1.04
KCNQ3O43525 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ3O43525 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNQ3O43525 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.58■■□□□ 1.04
KCNQ3O43525 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
KCNQ3O43525 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ3O43525 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNQ3O43525 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ3O43525 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNQ3O43525 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
KCNQ3O43525 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNQ3O43525 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNQ3O43525 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
KCNQ3O43525 AC067863.1-201ENST00000494933 530 ntBASIC21.57■■□□□ 1.04
KCNQ3O43525 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNQ3O43525 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNQ3O43525 RNF165-205ENST00000588679 2904 ntBASIC21.57■■□□□ 1.04
KCNQ3O43525 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNQ3O43525 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNQ3O43525 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
KCNQ3O43525 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNQ3O43525 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KCNQ3O43525 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNQ3O43525 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KCNQ3O43525 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.56■■□□□ 1.04
KCNQ3O43525 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ3O43525 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNQ3O43525 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ3O43525 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNQ3O43525 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ3O43525 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNQ3O43525 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNQ3O43525 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ3O43525 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNQ3O43525 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
KCNQ3O43525 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ3O43525 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNQ3O43525 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
KCNQ3O43525 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KCNQ3O43525 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
KCNQ3O43525 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
KCNQ3O43525 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ3O43525 AC006277.1-201ENST00000624348 1610 ntBASIC21.55■■□□□ 1.04
KCNQ3O43525 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ3O43525 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ3O43525 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
KCNQ3O43525 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ3O43525 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ3O43525 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ3O43525 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ3O43525 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ3O43525 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ3O43525 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ3O43525 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNQ3O43525 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
KCNQ3O43525 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.55■■□□□ 1.04
KCNQ3O43525 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ3O43525 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNQ3O43525 MIR4453-201ENST00000584019 89 ntBASIC21.55■■□□□ 1.04
KCNQ3O43525 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNQ3O43525 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ3O43525 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ3O43525 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ3O43525 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
KCNQ3O43525 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ3O43525 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
KCNQ3O43525 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ3O43525 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms