Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
COCHO43405 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
COCHO43405 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.43■□□□□ 0.38
COCHO43405 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.43■□□□□ 0.38
COCHO43405 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.43■□□□□ 0.38
COCHO43405 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.43■□□□□ 0.38
COCHO43405 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.43■□□□□ 0.38
COCHO43405 AC005237.2-201ENST00000434368 219 ntBASIC17.43■□□□□ 0.38
COCHO43405 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.43■□□□□ 0.38
COCHO43405 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.43■□□□□ 0.38
COCHO43405 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.43■□□□□ 0.38
COCHO43405 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.43■□□□□ 0.38
COCHO43405 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 AL355385.1-201ENST00000606123 409 ntBASIC17.43■□□□□ 0.38
COCHO43405 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.43■□□□□ 0.38
COCHO43405 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 WASH6P-202ENST00000359512 1437 ntBASIC17.43■□□□□ 0.38
COCHO43405 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
COCHO43405 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.43■□□□□ 0.38
COCHO43405 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COCHO43405 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COCHO43405 AL645608.8-201ENST00000606034 2086 ntBASIC17.43■□□□□ 0.38
COCHO43405 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.43■□□□□ 0.38
COCHO43405 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.42■□□□□ 0.38
COCHO43405 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
COCHO43405 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COCHO43405 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
COCHO43405 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 PCDHB17P-201ENST00000539533 2393 ntBASIC17.42■□□□□ 0.38
COCHO43405 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COCHO43405 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.42■□□□□ 0.38
COCHO43405 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.42■□□□□ 0.38
COCHO43405 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.42■□□□□ 0.38
COCHO43405 AL645939.2-201ENST00000427340 991 ntBASIC17.42■□□□□ 0.38
COCHO43405 SPCS2P4-201ENST00000436160 681 ntBASIC17.42■□□□□ 0.38
COCHO43405 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.42■□□□□ 0.38
COCHO43405 AC069335.1-201ENST00000489972 472 ntBASIC17.42■□□□□ 0.38
COCHO43405 HLA-J-203ENST00000494367 1087 ntBASIC17.42■□□□□ 0.38
COCHO43405 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.42■□□□□ 0.38
COCHO43405 RFPL4AP1-201ENST00000530883 850 ntBASIC17.42■□□□□ 0.38
COCHO43405 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.42■□□□□ 0.38
COCHO43405 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COCHO43405 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.42■□□□□ 0.38
COCHO43405 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 AC090340.1-201ENST00000620778 4980 ntBASIC17.42■□□□□ 0.38
COCHO43405 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.42■□□□□ 0.38
COCHO43405 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COCHO43405 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COCHO43405 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.42■□□□□ 0.38
COCHO43405 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.42■□□□□ 0.38
COCHO43405 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.41■□□□□ 0.38
COCHO43405 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COCHO43405 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.41■□□□□ 0.38
COCHO43405 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COCHO43405 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COCHO43405 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
COCHO43405 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COCHO43405 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COCHO43405 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COCHO43405 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COCHO43405 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COCHO43405 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COCHO43405 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.41■□□□□ 0.38
COCHO43405 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.41■□□□□ 0.38
COCHO43405 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms