Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPL17P11-201ENST00000417593 544 ntBASIC28.53■■■□□ 2.16
CUX2O14529 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC28.53■■■□□ 2.16
CUX2O14529 FADS2-205ENST00000517839 469 ntTSL 3 BASIC28.53■■■□□ 2.16
CUX2O14529 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC28.53■■■□□ 2.16
CUX2O14529 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC28.53■■■□□ 2.16
CUX2O14529 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC28.53■■■□□ 2.16
CUX2O14529 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CUX2O14529 AC004461.2-201ENST00000629517 803 ntBASIC28.53■■■□□ 2.16
CUX2O14529 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
CUX2O14529 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC28.52■■■□□ 2.16
CUX2O14529 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CUX2O14529 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC28.52■■■□□ 2.16
CUX2O14529 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CUX2O14529 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
CUX2O14529 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC28.52■■■□□ 2.16
CUX2O14529 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CUX2O14529 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CUX2O14529 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CUX2O14529 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CUX2O14529 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CUX2O14529 MIR33B-201ENST00000385104 96 ntBASIC28.52■■■□□ 2.16
CUX2O14529 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CUX2O14529 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC28.52■■■□□ 2.16
CUX2O14529 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC28.52■■■□□ 2.16
CUX2O14529 RPL13AP20-201ENST00000459725 609 ntBASIC28.52■■■□□ 2.16
CUX2O14529 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC28.52■■■□□ 2.16
CUX2O14529 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC28.52■■■□□ 2.16
CUX2O14529 AL139327.4-201ENST00000612362 153 ntBASIC28.52■■■□□ 2.16
CUX2O14529 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CUX2O14529 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CUX2O14529 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.16
CUX2O14529 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CUX2O14529 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.16
CUX2O14529 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
CUX2O14529 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC28.51■■■□□ 2.16
CUX2O14529 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CUX2O14529 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CUX2O14529 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC28.51■■■□□ 2.15
CUX2O14529 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CUX2O14529 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
CUX2O14529 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC28.51■■■□□ 2.15
CUX2O14529 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC28.51■■■□□ 2.15
CUX2O14529 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
CUX2O14529 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC28.51■■■□□ 2.15
CUX2O14529 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC28.51■■■□□ 2.15
CUX2O14529 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CUX2O14529 SLC25A47P1-201ENST00000531577 414 ntBASIC28.51■■■□□ 2.15
CUX2O14529 AP000812.2-201ENST00000538934 718 ntBASIC28.51■■■□□ 2.15
CUX2O14529 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CUX2O14529 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC28.51■■■□□ 2.15
CUX2O14529 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
CUX2O14529 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CUX2O14529 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
CUX2O14529 SLC22A20-204ENST00000530038 1673 ntBASIC28.5■■■□□ 2.15
CUX2O14529 FLJ13224-201ENST00000313737 1514 ntBASIC28.5■■■□□ 2.15
CUX2O14529 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC28.5■■■□□ 2.15
CUX2O14529 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CUX2O14529 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC28.5■■■□□ 2.15
CUX2O14529 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
CUX2O14529 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC28.5■■■□□ 2.15
CUX2O14529 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC28.5■■■□□ 2.15
CUX2O14529 YBX1P6-201ENST00000442962 1002 ntBASIC28.5■■■□□ 2.15
CUX2O14529 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC28.5■■■□□ 2.15
CUX2O14529 ARTN-209ENST00000479128 471 ntTSL 3 BASIC28.5■■■□□ 2.15
CUX2O14529 RERG-205ENST00000537647 935 ntTSL 2 BASIC28.5■■■□□ 2.15
CUX2O14529 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CUX2O14529 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CUX2O14529 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CUX2O14529 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
CUX2O14529 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CUX2O14529 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC28.49■■■□□ 2.15
CUX2O14529 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CUX2O14529 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
CUX2O14529 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
CUX2O14529 GZMB-202ENST00000382540 816 ntTSL 5 BASIC28.49■■■□□ 2.15
CUX2O14529 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC28.49■■■□□ 2.15
CUX2O14529 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC28.49■■■□□ 2.15
CUX2O14529 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC28.49■■■□□ 2.15
CUX2O14529 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC28.49■■■□□ 2.15
CUX2O14529 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CUX2O14529 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
CUX2O14529 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CUX2O14529 FAM86HP-204ENST00000513466 959 ntBASIC28.48■■■□□ 2.15
CUX2O14529 AC010328.2-201ENST00000597698 1111 ntBASIC28.48■■■□□ 2.15
CUX2O14529 AL022328.1-201ENST00000610050 478 ntBASIC28.48■■■□□ 2.15
CUX2O14529 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC28.48■■■□□ 2.15
CUX2O14529 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CUX2O14529 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CUX2O14529 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC28.48■■■□□ 2.15
CUX2O14529 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
CUX2O14529 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
CUX2O14529 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC28.48■■■□□ 2.15
CUX2O14529 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC28.48■■■□□ 2.15
CUX2O14529 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CUX2O14529 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
CUX2O14529 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC28.48■■■□□ 2.15
CUX2O14529 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC28.48■■■□□ 2.15
CUX2O14529 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC28.47■■■□□ 2.15
CUX2O14529 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CUX2O14529 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms