Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.1■□□□□ 0.33
TRIM38O00635 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM38O00635 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIM38O00635 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM38O00635 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 AC105020.1-201ENST00000435356 2205 ntBASIC17.09■□□□□ 0.33
TRIM38O00635 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRIM38O00635 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
TRIM38O00635 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 KLF4P1-201ENST00000412782 1185 ntBASIC17.09■□□□□ 0.33
TRIM38O00635 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 VN2R19P-201ENST00000442399 1052 ntBASIC17.09■□□□□ 0.33
TRIM38O00635 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM38O00635 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM38O00635 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM38O00635 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 AC018845.2-201ENST00000568326 409 ntBASIC17.09■□□□□ 0.33
TRIM38O00635 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 AC019129.2-201ENST00000609837 1235 ntBASIC17.09■□□□□ 0.33
TRIM38O00635 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 AGGF1P2-201ENST00000426656 2106 ntBASIC17.09■□□□□ 0.33
TRIM38O00635 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM38O00635 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM38O00635 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM38O00635 AC046158.3-201ENST00000624947 2558 ntBASIC17.08■□□□□ 0.33
TRIM38O00635 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM38O00635 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM38O00635 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRIM38O00635 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM38O00635 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM38O00635 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM38O00635 NCF1C-201ENST00000438382 1427 ntBASIC17.08■□□□□ 0.32
TRIM38O00635 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM38O00635 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM38O00635 AP006288.1-201ENST00000446065 395 ntBASIC17.08■□□□□ 0.32
TRIM38O00635 SIGLEC30P-201ENST00000455569 941 ntBASIC17.08■□□□□ 0.32
TRIM38O00635 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM38O00635 RPS15P9-201ENST00000494093 319 ntBASIC17.08■□□□□ 0.32
TRIM38O00635 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM38O00635 AC005829.1-201ENST00000570002 483 ntBASIC17.08■□□□□ 0.32
TRIM38O00635 MIR4751-201ENST00000578027 74 ntBASIC17.08■□□□□ 0.32
TRIM38O00635 AL596442.2-201ENST00000610240 980 ntBASIC17.08■□□□□ 0.32
TRIM38O00635 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM38O00635 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TRIM38O00635 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM38O00635 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM38O00635 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM38O00635 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM38O00635 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms