Protein–RNA interactions for Protein: H3BV60

TGFBR3L, Transforming growth factor-beta receptor type 3-like protein, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3LH3BV60 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 FLJ38576-201ENST00000623820 2459 ntBASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.73■□□□□ 0.11
TGFBR3LH3BV60 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 AP002472.1-201ENST00000577490 586 ntBASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 AC068137.2-201ENST00000605408 478 ntBASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TGFBR3LH3BV60 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 RNU1-129P-201ENST00000384064 167 ntBASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AC140658.5-201ENST00000438532 169 ntBASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 U1.21-201ENST00000580816 167 ntBASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AC010327.4-202ENST00000591484 748 ntBASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AL078644.1-201ENST00000609881 752 ntBASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TGFBR3LH3BV60 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.71■□□□□ 0.1
TGFBR3LH3BV60 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.71■□□□□ 0.1
TGFBR3LH3BV60 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TGFBR3LH3BV60 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TGFBR3LH3BV60 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.71■□□□□ 0.1
TGFBR3LH3BV60 AC092171.3-201ENST00000610122 2651 ntBASIC15.71■□□□□ 0.1
TGFBR3LH3BV60 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.7■□□□□ 0.1
TGFBR3LH3BV60 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TGFBR3LH3BV60 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TGFBR3LH3BV60 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TGFBR3LH3BV60 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TGFBR3LH3BV60 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TGFBR3LH3BV60 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TGFBR3LH3BV60 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms