Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 DOC2GP-204ENST00000639052 2548 ntBASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMX2-CTNND1H3BSU7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 CNN2P11-201ENST00000429351 262 ntBASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC092865.6-201ENST00000642101 219 ntBASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 HYMAI-201ENST00000635591 3347 ntBASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMX2-CTNND1H3BSU7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC103702.1-201ENST00000548801 2630 ntBASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC009336.1-201ENST00000608941 1553 ntBASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC097637.2-201ENST00000624096 1997 ntBASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TMX2-CTNND1H3BSU7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms